Gene Pfl01_2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2743 
Symbol 
ID3714484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3160484 
End bp3161851 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content61% 
IMG OID 
Productfumarate reductase/succinate dehydrogenase flavoprotein-like 
Protein accessionYP_348474 
Protein GI77458968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0233618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGG CCTATCAAGC ACAAGAGTTG GAACGCCATT TTGCAGGCGG ACATTTCCGT 
CGGTTGGGTG GCTGGGTCGA AAGTCCGGTT GATCTGCAGC CAGAGCTCGA AGGCGATGTA
AGCGCGGACG TCATCGTGAT CGGTGCCGGT TTCGCCGGGC TGTCCACCGC CCTGGAGCTT
ACGGCGCTGG GAGCGAAGGT CATTATCCTC GAGCAGGAGT TTGCCGGTTT CGGTGCCAGC
GGTCGGAATG CCGGTTATCT GGGCGGGAGC ATCGGCATTG AGTTCGAGTT GTTCCTGAAA
CGTGTCGGCA AGGAAAAAGC GCAAAATATC GTCAGGTTCT ATGACGAAGC GGTCGCCTAC
GTCGAAGGTC GGTTGCGCGA ACTGGGGATC GACTGCGACT ACAACGCCTC GGGCATCATC
AGGGCGGGGA TCCATCCGTC GCAAGAAAAG AGGCTGCGCA AAAGCATGGC CGTGGGCCAC
GAATTGGGTT CGCAAACCGA GTTTCTGGAT CAGGCACAAA TGCGCGCGCG GGGGATTCCA
CCGGCCTTTC TGTTTGGCTG TCTGCAACGC CACGGCGGTA CCCTGGACCC AGGCAAATAC
GTGATGGGCC TGCGCCGCGC TGCACTCCAG GCGGGGGTGA GGCTGTATGA AAACACCACG
CTTGAGTCGT ACTCCGACGG GCCGACGATC ACCTGCCGGA CGCCACGCGG GCGGGCGAGT
GCGCCAATAG TGGTGCTGGC CACCAATGCC TATACGCCGC AACTCGGTCT TCTGCGCGAC
AAAGTCGTAC CGTTTCGGGT TTCGGCGGTC GAAACCGAGC CATTGACACC ACAGCAGTTG
GCATCGCTGG GCTGGGCAGG GCGGGAAGGG TTGACCACGC CGCACCTGGT GATGGAAAGC
CATCGCCTGA CCGCACGCAA TACGCTGCTG ATGACCACCA AACGGCTGGG TTATGCCTAC
GGCTCGAAAA CCCCGAACAT TCCCGATGAG GTGACCTACC GCGCGTTGCA AGACAACCTT
GGCGTGCGTT TCCCGACGTT ACGCGGTGTC GGCATTCAAG CGTGCTGGAG TGGTTACGTC
AGCATGGCCT ACGACGCGTT GCCGGTGGTG GGCGAAACCG GGTCGCACCA CAACATTCTC
TACACCGCGG GTTGCTCCGG ACACGGTGTC GCCTCGCAGT CGCTGATCGG CCATCTGCTG
GCAGAAAGGA TCGGCGGTAT CGAGCATCCG CTGCTCGCCG CGCTGCGGCA TAAAACTCCG
AAAACCCTGC CCGAACCGCT GCAGTGGTGC GCCGTGAATG TGGCGCTGGA GGGAGCACAT
CTGCTGGACG AATACACCAA CCGCAAAGTT GTGCACCCTC ATGCCTGA
 
Protein sequence
MSMAYQAQEL ERHFAGGHFR RLGGWVESPV DLQPELEGDV SADVIVIGAG FAGLSTALEL 
TALGAKVIIL EQEFAGFGAS GRNAGYLGGS IGIEFELFLK RVGKEKAQNI VRFYDEAVAY
VEGRLRELGI DCDYNASGII RAGIHPSQEK RLRKSMAVGH ELGSQTEFLD QAQMRARGIP
PAFLFGCLQR HGGTLDPGKY VMGLRRAALQ AGVRLYENTT LESYSDGPTI TCRTPRGRAS
APIVVLATNA YTPQLGLLRD KVVPFRVSAV ETEPLTPQQL ASLGWAGREG LTTPHLVMES
HRLTARNTLL MTTKRLGYAY GSKTPNIPDE VTYRALQDNL GVRFPTLRGV GIQACWSGYV
SMAYDALPVV GETGSHHNIL YTAGCSGHGV ASQSLIGHLL AERIGGIEHP LLAALRHKTP
KTLPEPLQWC AVNVALEGAH LLDEYTNRKV VHPHA