| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2725 |
|---|
| Symbol | |
|---|
| ID | 3714420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3141354 |
|---|
| End bp | 3142205 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_348456 |
|---|
| Protein GI | 77458950 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGA GTGACATGCG GATCTTCCTG GCGATTGCCC GCAACGGCTC GCTGGGCGGA
GCCGCCAGGG AGTTGGGGGT CAGTCACCCA ACGGTCGGAC GGCGCTTGCA GGTGCTTGAA
CAAACCAGTG GGCAAGCCTT TTTCCTGCGG ACCGCTCAAG GGCTGGTGCT CACGGACAGT
GGCGAGAGGA TTCTCGGTCT GGCGCAGGAC ATGGAACACA GCGCGTTGGC CATCGAGCGG
CGTCTGGCGG GGCATGGTGA TCAGCCTGAA GGCCTGTTGC GGATATCCTC AGCCGACTGG
TTCGCCTGTC ATGTTTTGTC GCCGGTTCTC AGCGAACTGG TGCACCGCTA CCCGTTGATC
GTTCCCGAAG TCATCGCCGG GCATCGACTG TTCGACCTTG CCCGCCGGGA TGCCGACATC
GCTTTCCGGA TCGTGCCTTT CACCGAACCC GACATCGTGC ACCGCAAGCT GACAACTCTG
TCGTACGGCC TATACGCGGC TTCGCATGCC CCGACGCCGC AGCCGGACGG CGAGGGGCTT
GGCCTGATCC TGATGAACAT CGCCCAGGCC CATTACCCGG ACGTGCAATG GCTGCAGCAA
CGCTATCCGC TGGCCCGCAC CGTGTTCACC AGCAGCAGCC GTACGGTTCA GGCACAGATG
TGCGCGAAGG GGCTGGGCGT TGCCGTCTTG CCCCGCGTCC TCGGTGACTC CGTGTCGGGA
CTGCGACTGC TGGATGAGGA CGAGCCACCG CCAGGGCGGG ACATCTGGAT GGGGTATCAC
CAGGACATGC GCCAGATGGA CCGGCTGCGC GCACTGGCCG ACCTTGCCTC CAGCATGATC
GGTACGGGGT AG
|
|---|
| Protein sequence | MDWSDMRIFL AIARNGSLGG AARELGVSHP TVGRRLQVLE QTSGQAFFLR TAQGLVLTDS
GERILGLAQD MEHSALAIER RLAGHGDQPE GLLRISSADW FACHVLSPVL SELVHRYPLI
VPEVIAGHRL FDLARRDADI AFRIVPFTEP DIVHRKLTTL SYGLYAASHA PTPQPDGEGL
GLILMNIAQA HYPDVQWLQQ RYPLARTVFT SSSRTVQAQM CAKGLGVAVL PRVLGDSVSG
LRLLDEDEPP PGRDIWMGYH QDMRQMDRLR ALADLASSMI GTG
|
|---|
| |