Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2690 |
Symbol | |
ID | 3714365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3097497 |
End bp | 3099815 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | DEAD_2 |
Protein accession | YP_348421 |
Protein GI | 77458915 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00215798 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAGCTACA GCATCGCGGT GCGGGCGCTG TGCGAATTCA CCGCGAAAAC CGGTGACCTC GACCTGCGCT TCACCCCGTC ACCGACTGCG CTGGAGGGCA TCGCCGGGCA TCGCACCGTG GCGTCCCGGC GCAACGACGC CTACCAAAGC GAAGTGGCGC TGGAGGGCGC ATTCGGGCCA TTGAAGGTCA AGGGTAGGGC GGATGGCTAC GACCCGAAGC AGAACTGCCT GGAAGAAGTC AAAACCTACC GCGGCGACCT GAGCAAGCAA CCGGCCAATC ACCGTTCGTT GCATTGGGCC CAGGCAAAAA TTTACGGCTG GTTGATGTGC TGTCGATTGC AGCTTGAGCA GATCAATCTG GCGCTGGTGT ATTTCGACAT CGTCACGGAA AAGGAAACCT GTCTGGTCGA AGCGTTCAGC GCCGATGCGC TGCGGCAGTT CTTCGAACAA CAGTGCGGTT TGTTCCTGGC GTGGGCCGAA CAGGAAATGG CCCACCGCGA AGCGCGCAAC CGGGCGGCGC AGCAGCTGGG GTTTCCCCAT GCCGCGTTTC GCCCCGGCCA GCGTCACCTC GCCGAATCGG TGTTCAAAGC CGTCAGCACC GGCCGCTGCC TGATGGCCCA GGCCCCGACC GGGATCGGCA AGACCCTCGG CACCCTGTTT CCGATGCTCA AGGCGATGGC GCCGCAGCAA CTGGACAAGG TCTACTTCCT CACCGCCAAG ACACCCGGAC GCAAACTGGC GCTGGATGCG GCGCAAGTGC TGTTCGATCA CAGCGAAACC TTGCCGCTGC GGGTGCTGGA AATGGTCGCC CGGGACAAGG CCTGCGAACA CCCGGACAAG GCTTGCCACG GCGAATCCTG CCCGTTGGCC CAAGGCTTTT ACGACCGTTT GCCCGCTGCC CGCGAAGCCG CCAGCCAATT GCGTCTGCTG GATCAGGCCG CACTGCGTGA AGTCGCGGCG CAGCATGCGG TGTGCCCGTA TTACCTGAGC CAGGAAATGG CCCGCTGGGC CGACGTGGTG GTGGCGGACT ACAACTACTA CTTCGATTTC AGCGCGCTGC TGTTCGGTCT GGCTCAGTTC AATCAATGGA ACGTTGCGGT GCTGGTCGAC GAGTCGCATA ACCTGGTCGA GCGCGGGCGG CAGATGTACA GCGCGACGCT CGATCAGGCA ACACTGGGCA GCGTGCGCAA AACCGCGCCC GAGGCCTTGA AAAAGTCGTT GCAACGGGTC AATCGCGAAT GGAACGCCCT GCACAATGAC CAGTTGGCGC CGTATCAGGC CTACGACAAG GCGCCGGAAA AACTGTTGCA GGCGCTCTCA TCCTGCACGG CGAGCATCGG CGACTACCTC AACGATCACC CGCAAGGACT CGACAGCGGA TTGCAGAATT TCTACTTCGA GATGCTGCAA TTCGGTCGGG TAGCGGAACT GTTCGACGCG CATTACCTGT TCGACATCAG CAAACGTGAC CTCGAACGCA AACGCCCGTT ATCGCAACTG TGCCTGCGCA ACGTGGTGCC GGCGGCGTTC ATCGGCCCGC GCCTGACGGC GGCGCGCAGC AGCGTGCTGT TTTCCGCCAC CCTCAGCCCG CGCCACTATT ACGCGGATTT GCTCGGCACG CCGGCCGACA CGGTCTGGAT CGACGTCGAG TCGCCGTTCA GCGCCGAACA ATTGCAGGTG CAGATCGTCA GCCGGATTTC CACGCGTTTC ACGCACCGGC AAGCATCGCT GGAACCGATT GTCGAGCTGA TCGCCCGCCA GTTCAGTGAA CGTCCGGGCA ACTACCTGGC GTTCTTCAGC AGTTTCGATT ACCTGCAACA GGTCGCGCAG TTGCTGGCCG AGCGCCACCC TCACATCACC CGGTGGCAGC AATCCCGGGG CATGGACGAA GGGGCGCGTC AGGCGTTTCT CGATCAATTC ACCGCCGACA GCCAGGGAAT CGGCTTCGCC GTGCTCGGCG GCGCGTTCGG CGAAGGCATC GATCTGCCCG GCGCGCGGCT GATCGGCGCG TTCATCGCCA CCCTCGGGCT GGCTCAGCTC AACCCGGTCA ATGAACAGAT GAAACGCCGT ATGGCCGCGA TCTTCGGCGC CGGCTACGAC TACACCTATC TGTTCCCCGG CGTGCAGAAA GTGGTACAGG CCGCCGGACG GGTGATCCGC ACCCAGCAGG ATCGCGGCGT GGTGATGCTG ATCGATGATC GTTTTGCCGA GGGCCGGATT CGGCAGTTGC TGCCGCGCTG GTGGCAAATC GATCAAGCAG AAGCGGCTGT CCATTCCACC GGTTTGACGC ATACTCCTGT CATTGAGAAT TTGCTTTGA
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Protein sequence | MSYSIAVRAL CEFTAKTGDL DLRFTPSPTA LEGIAGHRTV ASRRNDAYQS EVALEGAFGP LKVKGRADGY DPKQNCLEEV KTYRGDLSKQ PANHRSLHWA QAKIYGWLMC CRLQLEQINL ALVYFDIVTE KETCLVEAFS ADALRQFFEQ QCGLFLAWAE QEMAHREARN RAAQQLGFPH AAFRPGQRHL AESVFKAVST GRCLMAQAPT GIGKTLGTLF PMLKAMAPQQ LDKVYFLTAK TPGRKLALDA AQVLFDHSET LPLRVLEMVA RDKACEHPDK ACHGESCPLA QGFYDRLPAA REAASQLRLL DQAALREVAA QHAVCPYYLS QEMARWADVV VADYNYYFDF SALLFGLAQF NQWNVAVLVD ESHNLVERGR QMYSATLDQA TLGSVRKTAP EALKKSLQRV NREWNALHND QLAPYQAYDK APEKLLQALS SCTASIGDYL NDHPQGLDSG LQNFYFEMLQ FGRVAELFDA HYLFDISKRD LERKRPLSQL CLRNVVPAAF IGPRLTAARS SVLFSATLSP RHYYADLLGT PADTVWIDVE SPFSAEQLQV QIVSRISTRF THRQASLEPI VELIARQFSE RPGNYLAFFS SFDYLQQVAQ LLAERHPHIT RWQQSRGMDE GARQAFLDQF TADSQGIGFA VLGGAFGEGI DLPGARLIGA FIATLGLAQL NPVNEQMKRR MAAIFGAGYD YTYLFPGVQK VVQAAGRVIR TQQDRGVVML IDDRFAEGRI RQLLPRWWQI DQAEAAVHST GLTHTPVIEN LL
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