Gene Pfl01_2690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2690 
Symbol 
ID3714365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3097497 
End bp3099815 
Gene Length2319 bp 
Protein Length772 aa 
Translation table11 
GC content62% 
IMG OID 
ProductDEAD_2 
Protein accessionYP_348421 
Protein GI77458915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00215798 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGCTACA GCATCGCGGT GCGGGCGCTG TGCGAATTCA CCGCGAAAAC CGGTGACCTC 
GACCTGCGCT TCACCCCGTC ACCGACTGCG CTGGAGGGCA TCGCCGGGCA TCGCACCGTG
GCGTCCCGGC GCAACGACGC CTACCAAAGC GAAGTGGCGC TGGAGGGCGC ATTCGGGCCA
TTGAAGGTCA AGGGTAGGGC GGATGGCTAC GACCCGAAGC AGAACTGCCT GGAAGAAGTC
AAAACCTACC GCGGCGACCT GAGCAAGCAA CCGGCCAATC ACCGTTCGTT GCATTGGGCC
CAGGCAAAAA TTTACGGCTG GTTGATGTGC TGTCGATTGC AGCTTGAGCA GATCAATCTG
GCGCTGGTGT ATTTCGACAT CGTCACGGAA AAGGAAACCT GTCTGGTCGA AGCGTTCAGC
GCCGATGCGC TGCGGCAGTT CTTCGAACAA CAGTGCGGTT TGTTCCTGGC GTGGGCCGAA
CAGGAAATGG CCCACCGCGA AGCGCGCAAC CGGGCGGCGC AGCAGCTGGG GTTTCCCCAT
GCCGCGTTTC GCCCCGGCCA GCGTCACCTC GCCGAATCGG TGTTCAAAGC CGTCAGCACC
GGCCGCTGCC TGATGGCCCA GGCCCCGACC GGGATCGGCA AGACCCTCGG CACCCTGTTT
CCGATGCTCA AGGCGATGGC GCCGCAGCAA CTGGACAAGG TCTACTTCCT CACCGCCAAG
ACACCCGGAC GCAAACTGGC GCTGGATGCG GCGCAAGTGC TGTTCGATCA CAGCGAAACC
TTGCCGCTGC GGGTGCTGGA AATGGTCGCC CGGGACAAGG CCTGCGAACA CCCGGACAAG
GCTTGCCACG GCGAATCCTG CCCGTTGGCC CAAGGCTTTT ACGACCGTTT GCCCGCTGCC
CGCGAAGCCG CCAGCCAATT GCGTCTGCTG GATCAGGCCG CACTGCGTGA AGTCGCGGCG
CAGCATGCGG TGTGCCCGTA TTACCTGAGC CAGGAAATGG CCCGCTGGGC CGACGTGGTG
GTGGCGGACT ACAACTACTA CTTCGATTTC AGCGCGCTGC TGTTCGGTCT GGCTCAGTTC
AATCAATGGA ACGTTGCGGT GCTGGTCGAC GAGTCGCATA ACCTGGTCGA GCGCGGGCGG
CAGATGTACA GCGCGACGCT CGATCAGGCA ACACTGGGCA GCGTGCGCAA AACCGCGCCC
GAGGCCTTGA AAAAGTCGTT GCAACGGGTC AATCGCGAAT GGAACGCCCT GCACAATGAC
CAGTTGGCGC CGTATCAGGC CTACGACAAG GCGCCGGAAA AACTGTTGCA GGCGCTCTCA
TCCTGCACGG CGAGCATCGG CGACTACCTC AACGATCACC CGCAAGGACT CGACAGCGGA
TTGCAGAATT TCTACTTCGA GATGCTGCAA TTCGGTCGGG TAGCGGAACT GTTCGACGCG
CATTACCTGT TCGACATCAG CAAACGTGAC CTCGAACGCA AACGCCCGTT ATCGCAACTG
TGCCTGCGCA ACGTGGTGCC GGCGGCGTTC ATCGGCCCGC GCCTGACGGC GGCGCGCAGC
AGCGTGCTGT TTTCCGCCAC CCTCAGCCCG CGCCACTATT ACGCGGATTT GCTCGGCACG
CCGGCCGACA CGGTCTGGAT CGACGTCGAG TCGCCGTTCA GCGCCGAACA ATTGCAGGTG
CAGATCGTCA GCCGGATTTC CACGCGTTTC ACGCACCGGC AAGCATCGCT GGAACCGATT
GTCGAGCTGA TCGCCCGCCA GTTCAGTGAA CGTCCGGGCA ACTACCTGGC GTTCTTCAGC
AGTTTCGATT ACCTGCAACA GGTCGCGCAG TTGCTGGCCG AGCGCCACCC TCACATCACC
CGGTGGCAGC AATCCCGGGG CATGGACGAA GGGGCGCGTC AGGCGTTTCT CGATCAATTC
ACCGCCGACA GCCAGGGAAT CGGCTTCGCC GTGCTCGGCG GCGCGTTCGG CGAAGGCATC
GATCTGCCCG GCGCGCGGCT GATCGGCGCG TTCATCGCCA CCCTCGGGCT GGCTCAGCTC
AACCCGGTCA ATGAACAGAT GAAACGCCGT ATGGCCGCGA TCTTCGGCGC CGGCTACGAC
TACACCTATC TGTTCCCCGG CGTGCAGAAA GTGGTACAGG CCGCCGGACG GGTGATCCGC
ACCCAGCAGG ATCGCGGCGT GGTGATGCTG ATCGATGATC GTTTTGCCGA GGGCCGGATT
CGGCAGTTGC TGCCGCGCTG GTGGCAAATC GATCAAGCAG AAGCGGCTGT CCATTCCACC
GGTTTGACGC ATACTCCTGT CATTGAGAAT TTGCTTTGA
 
Protein sequence
MSYSIAVRAL CEFTAKTGDL DLRFTPSPTA LEGIAGHRTV ASRRNDAYQS EVALEGAFGP 
LKVKGRADGY DPKQNCLEEV KTYRGDLSKQ PANHRSLHWA QAKIYGWLMC CRLQLEQINL
ALVYFDIVTE KETCLVEAFS ADALRQFFEQ QCGLFLAWAE QEMAHREARN RAAQQLGFPH
AAFRPGQRHL AESVFKAVST GRCLMAQAPT GIGKTLGTLF PMLKAMAPQQ LDKVYFLTAK
TPGRKLALDA AQVLFDHSET LPLRVLEMVA RDKACEHPDK ACHGESCPLA QGFYDRLPAA
REAASQLRLL DQAALREVAA QHAVCPYYLS QEMARWADVV VADYNYYFDF SALLFGLAQF
NQWNVAVLVD ESHNLVERGR QMYSATLDQA TLGSVRKTAP EALKKSLQRV NREWNALHND
QLAPYQAYDK APEKLLQALS SCTASIGDYL NDHPQGLDSG LQNFYFEMLQ FGRVAELFDA
HYLFDISKRD LERKRPLSQL CLRNVVPAAF IGPRLTAARS SVLFSATLSP RHYYADLLGT
PADTVWIDVE SPFSAEQLQV QIVSRISTRF THRQASLEPI VELIARQFSE RPGNYLAFFS
SFDYLQQVAQ LLAERHPHIT RWQQSRGMDE GARQAFLDQF TADSQGIGFA VLGGAFGEGI
DLPGARLIGA FIATLGLAQL NPVNEQMKRR MAAIFGAGYD YTYLFPGVQK VVQAAGRVIR
TQQDRGVVML IDDRFAEGRI RQLLPRWWQI DQAEAAVHST GLTHTPVIEN LL