| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2681 |
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| Symbol | |
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| ID | 3714356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3082244 |
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| End bp | 3083593 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_348412 |
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| Protein GI | 77458906 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000293137 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGCG CGAGCATGAA CACGCAAAAC GAAGCCACGA TGGAAAACGA CTACATCACC
GAACGCCCGG AGCGCGATGC GAAGTTCTTC GCCCGCATGG GCTGGATTCT GGCGCTGGTC
GGTGCCGGCA GTTTCTTTAC CTGGGCGGCA TTGGCGCCGC TGGATCAAGG CATTCCGGTG
CAAGGCACGG TGGTGGTGTC GGGCAAGCGC AAGGCCGTGC AGTCGATGAG CAGCGGCGTG
GTCAGCCGGA TTCTGGTGCG CGAAGGCGAA ATCGTGAAGC AGGGCCAGCC GCTGTTCCGC
CTCGACCAGA CTCAGGTCGC CGCCGACGTG CAGTCGTTGC AGGCGCAATA CCGCATGGCC
TGGGCCAGCC TGGCGCGCTG GCAGGCCGAG CGTGACAACC TCAAGCAAGT GACCTTTCCG
GCAGAACTGA GCGATAACGC CGATCCGCGC CTGGCGCTGG TGCTGGAAGG CCAGCGGCAA
CTGTTCAGCA GCCGCCGTGA AGCGTTTTCC CGCGAGCAGG CCGCCCTGCG TGCCAGCATC
GAAGGTGCCA CTGCGCAACT GGCGGGCATG CGCCGCGCCC GTACTGACCT CAACGCGCAG
GCCGACTCGC TGCAACAGCA GTTGAGCAAT CTGCAACCGC TGGCCGACAA CGGCTACATC
CCGCGCAACC GCTTGATGGA ATACCAGCGT CAGCTGTCGC AGGTTCAGCA GCAACTGGCC
GAGAACACGG GCGAAAGTGG CCGGGTAGAG CAGGGCATTC TCGAGTCCCG CCTGAAGCTG
CAACAGCACG GCGAGGAGTA CCAGAAGGAA GTCCGCACTC AACTGGCCGA CGCGCAACTG
AAAAGCGTCA CGCTGTCGGA GCAACTCACC TCCGCCGGTT TCGACCTGCA ACACAGCGAA
ATCCTTGCCA CCGCCGACGG CGTGGCAGTC AACCTCGGCG TACACACCGA AGGCGCCGTG
GTGCGTCAGG GCGAAACCCT GCTGGAAATC GTCCCGCAAG GCACGCGCCT GGAAGTCGAA
GGCCACCTGC CGATCAACCT GATCGACAAG GTCGGCACGC ACTTGCCGGT CGACATCCTG
TTCACCGCCT TCAACCAGAG CAAGACGCCA CGGGTGCCCG GCGAAGTCAG CCTGATTTCC
GCCGACCAGA TGGTCGACGA GAAAACCGGC GTGCCGTACT ACGTGTTGCG CAGCAGCGTC
AGCGATCAGG CCATGGAAAA GCTCAATGGC CTGGTGATCA AACCCGGCAT GCCGGCGGAA
ATGTTCGTGC GCACTGGCGA ACGTTCACTC CTCAACTACC TGTTCAAGCC GCTGCTCGAC
CGCGCCGGTT CCGCGTTGAC CGAAGAATAA
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| Protein sequence | MSSASMNTQN EATMENDYIT ERPERDAKFF ARMGWILALV GAGSFFTWAA LAPLDQGIPV
QGTVVVSGKR KAVQSMSSGV VSRILVREGE IVKQGQPLFR LDQTQVAADV QSLQAQYRMA
WASLARWQAE RDNLKQVTFP AELSDNADPR LALVLEGQRQ LFSSRREAFS REQAALRASI
EGATAQLAGM RRARTDLNAQ ADSLQQQLSN LQPLADNGYI PRNRLMEYQR QLSQVQQQLA
ENTGESGRVE QGILESRLKL QQHGEEYQKE VRTQLADAQL KSVTLSEQLT SAGFDLQHSE
ILATADGVAV NLGVHTEGAV VRQGETLLEI VPQGTRLEVE GHLPINLIDK VGTHLPVDIL
FTAFNQSKTP RVPGEVSLIS ADQMVDEKTG VPYYVLRSSV SDQAMEKLNG LVIKPGMPAE
MFVRTGERSL LNYLFKPLLD RAGSALTEE
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