Gene Pfl01_2664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2664 
Symbol 
ID3714320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3059193 
End bp3060938 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content54% 
IMG OID 
ProductGTP-binding protein, HSR1-like 
Protein accessionYP_348395 
Protein GI77458889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.760188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAT TTAAACAGTT CAATGCCAGC AAGACCGAGG TGATCAAGTC GCTCGACAAC 
CTCCAGAAAC TGGTGGGCGC GCTGGAGGCA CTTGGGCTGG ACGTCTCTCA GGACATCGAA
AAGATCAGGA AGGCGATCGG CGACGTTCAG TCCGATGCCT TGCGTATCGC TTTGCTGGGT
GCATTTTCCG ACGGCAAGAC CAGCGTAGTT GCCGGCTGGC TGGGCCAGGT CATGAAAGAC
ATGAAGATCG ACACCAATGA GTCTTCGGAC GCATTGGCGA TCTATCGTCC CGACAATCTT
CAGGACCGTT GTGAGATTGT TGACACTCCC GGTCTGTTCG GTGACAAGGA AAAGGCAGCT
GAAAACGGCG CGCTGGTGCA ATACGGCGAT ATCACCAAGA ACTATATTTC CGAGGCGCAT
CTGATCTTCT ATGTGGTCGA TGCCACGAAC CCGCTCAAGG AAAGTCACCA GGACATCGTC
CGCTGGGTAC TGCGCGATCT TAACAAGTTG AGTTCGACCA TTTTCGTCAT CAATAAAATG
GATGAAGTTG CCGATCTGCG CGATGCCGAA GAGTTCGAGC AGCAGAGCAC AATCAAAAAG
AACAACCTGC TGGATAAATT GCAGCGTTTT GTCGACCTCT CTGCGGCCGA GCGTGATGCG
ATCAATGTGG TCTGCGTAGC CTCCAACCCG AATAGCCGCG GACTGGAGTT CTGGCTGGAG
CAAAAGGACC TGTATGACCA GCGCTCGCGA ATCAGCGAAC TCAAAGTGGT GACGCAACAA
GTACTCGATG GCAGCGGTCG TGAAACCCTG ATCAAGAAGA CCGGCATCGA TGTCGTGCGT
GATGTGCTGG GCAAGAAAAT CGCCCTGGCT CAGGACGAGT TGATCAAGTT CAGGCTGTTG
GCCGATAACC AGCGACGTGA TTCCGCACGC ATCCAGGAGG ACATTGCCGA GGGCAAACGG
AAAGTCCTAG CGACGGTCGG CAACCTCTAC GAAGAGTTGA ACAACCTCGA AACCGATTTG
CTTAACAGCA TTCGCACATT GCCGCGCGAC CAGGTACGCG CCTTTCTCGA ATCGCAGATT
GGTTTTTCGA ACAATGATAT CGGCGAGAAG CTGCGCTTTC GCATAGATCA CCTGTTCAGC
ACCGCATTCA ACCAGTCCTC AAGCATCATG AGCGGCATCA GTGCCAAGAT CGAACATCAA
CTAGACAGCT CTTCGGACTT CGCCGACAGC ATCACCGCGT CGGCGTTGTC AGCGTCGAGC
CGTGCGCTGA CGGCCGTATC GAAAATTCCT GTTGAAAGCA TCAAGAGTGG CGTATTCCTG
GCCCGTGAGA CCCTGAAAAA CCTCACCGGC TATGTCTACA AATTCAAACC TTGGGAAGCA
ACCAAGCTGG CTGCCAACAT CAGCCGGTGG GCCGGCCCGA TTGGTGCAGG CATTCAGGTG
TTGACTGACG TCATTAGTGT TGCCCAGCAG CAGCGTGCGG AAACCGAACT GAAACAGTTG
CAGGGCGATT TGGCCGAAGT GGTCAAAAGC TACTTTGCCG AGCCAATGAA ACTGCTGATG
GATCACGAAA AAGTCATGGA TATTTTCGCG CCACAAATCA AGGCGTTCGA GAAGATCCTG
GTCGAGCAGG AAGCTAGCCT CGATGACCTG CGCAACCGCC AGACTCAACT GGCAGAGCTT
GAGACCCACT TAAGCCAAGC GTTTGACTCG CAAAATGTCA TCGAAGGCGA GTACGGCGTG
GTTTGA
 
Protein sequence
MEQFKQFNAS KTEVIKSLDN LQKLVGALEA LGLDVSQDIE KIRKAIGDVQ SDALRIALLG 
AFSDGKTSVV AGWLGQVMKD MKIDTNESSD ALAIYRPDNL QDRCEIVDTP GLFGDKEKAA
ENGALVQYGD ITKNYISEAH LIFYVVDATN PLKESHQDIV RWVLRDLNKL SSTIFVINKM
DEVADLRDAE EFEQQSTIKK NNLLDKLQRF VDLSAAERDA INVVCVASNP NSRGLEFWLE
QKDLYDQRSR ISELKVVTQQ VLDGSGRETL IKKTGIDVVR DVLGKKIALA QDELIKFRLL
ADNQRRDSAR IQEDIAEGKR KVLATVGNLY EELNNLETDL LNSIRTLPRD QVRAFLESQI
GFSNNDIGEK LRFRIDHLFS TAFNQSSSIM SGISAKIEHQ LDSSSDFADS ITASALSASS
RALTAVSKIP VESIKSGVFL ARETLKNLTG YVYKFKPWEA TKLAANISRW AGPIGAGIQV
LTDVISVAQQ QRAETELKQL QGDLAEVVKS YFAEPMKLLM DHEKVMDIFA PQIKAFEKIL
VEQEASLDDL RNRQTQLAEL ETHLSQAFDS QNVIEGEYGV V