Gene Pfl01_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2625 
Symbol 
ID3714266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3001715 
End bp3002692 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348356 
Protein GI77458850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.614484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACCAG TGAGGTTATT AATAAACCGC TTAATCTTGA CGGTTTTTAT ATGCTTCACA 
CCTAACTCTT TCTCGGAGCC GGTGCGTGAA GCTTCTTCAG GCATTATTTT ATTCAATCAG
TTAAAACTCG GAGAAGCTAT CTCCGCGTTA GAAAAAGAGG CACAATCTGG AAGCGTCGAG
TCTCAGTACT ACTTAGGGGA GGCTCTGCGA AAACGCAACC GTTATATGAC ACCAGAAGCA
CAGCACTGGT ATGAAACAGC GGCAGTGAAT GGTTCCATAT ATGCAATGAT CCAGTTAGGT
CGCAAAAATG AAGATTTATG CAAAATCATG GATAACTGTC CTGCCAGCGC CAAGTCTCCT
GTTGAGTGGC TTACACATGC CAAAGAATTG CTGCTGGCAA AAGCCAACAA CGGTGATCCT
GAGTCGTTGT ATCTAATGTA TGAGATAACG TTTGATCGCA TTTGGCTCGA GAAGTCCGCA
AATGCAGGAT ATGCCCTCGC ACAATACTGG ATGGCGGTAA GTGAACGACA AGGTGAGGGT
TTCTTTTTTA TCCCAGGAAG ACGTGACGCC TCTGTTAAAA ACTGGCTTTT GCTTTCTTCT
GAAGGCGGCT ATCCCAAAGC AATGATGGAC TATCTTGAAA TACTGCATAT AGAAGGTGAT
ACAGAGAGCA TTCGCCATTG GCTTGTGTTA GGAGCCGAGA CCGGTTACCA AGCTGCTGTA
AGCAATTATG GCGCCTACAT AGCCCATACG CTGGATAAAG TTGGTTACCC ACTCGATATG
ATAAAAGGGT ATGCACTGTT CACCTTGCTT GGCGAGCTTG ATGATAGCGG TGGAATCGGA
CGGTATGTTG AGCGAAAAAG TGACGAAATT CGCAACAAAA TGACAGCCGA ACAAATCGAA
GAATCAAAGA TCGTAGCAAA GGAATGGAAA GCCACCCACC CGCCGCTCTC CTTTTTCCCT
GACAAGCTTG GAAACTAG
 
Protein sequence
MKPVRLLINR LILTVFICFT PNSFSEPVRE ASSGIILFNQ LKLGEAISAL EKEAQSGSVE 
SQYYLGEALR KRNRYMTPEA QHWYETAAVN GSIYAMIQLG RKNEDLCKIM DNCPASAKSP
VEWLTHAKEL LLAKANNGDP ESLYLMYEIT FDRIWLEKSA NAGYALAQYW MAVSERQGEG
FFFIPGRRDA SVKNWLLLSS EGGYPKAMMD YLEILHIEGD TESIRHWLVL GAETGYQAAV
SNYGAYIAHT LDKVGYPLDM IKGYALFTLL GELDDSGGIG RYVERKSDEI RNKMTAEQIE
ESKIVAKEWK ATHPPLSFFP DKLGN