| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2583 |
|---|
| Symbol | |
|---|
| ID | 3714184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 2958560 |
|---|
| End bp | 2960806 |
|---|
| Gene Length | 2247 bp |
|---|
| Protein Length | 748 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_348314 |
|---|
| Protein GI | 77458808 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.518679 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCGC CCATCACCCG TTCCATGACC CTCACCCTGG GCCTGTGCAG CGTTGCATTG
AGCCCGGATC TGCTGGCTGA AACCGACACA GAAAAACAGT TGCCCCCCGC TACACCGGCG
CTGGAGCTGG CCTCCACGAA CATCACCGCC CAAGGCCTGG GCAGCACCAC TGAAAACACC
CACGCCTACA CCACCAGTGC CATGAGCACG GCAACGCGGT TGAACCTGTC GTTCAAGGAA
ACCCCGCAGT CAGTGTCTGT GGTCACTCGT CAGCAGATGG ATGATTTCAA GCTCGGTACA
TTGACCGAGG CCATGAGCCA GACCACCGGC GTCGTGGTGC AGCACTACGA CTCGGATCGG
GTCAACTATT CATCCCGTGG CTACTCGATC AACAACTTTC AGGTTGACGG GATGCTCAAC
ACTTTCAGCC GAATGAAGTC CGATTCCGAC ACGATCATCT ACGACCGGAT CGAAGTGGTA
CGGGGCGCCA CCGGCCTGAC CACCGGCGCA GGTGATCCTT CTGCCACCAT CAACATGGTG
CGCAAACGCC CCACCGCGCA GTTGCAGGCG CTGGCCGGCG TCAGCGGCGG CAGTTATGAC
GATTACTACA GTTACGTGGA CGTGGGTGGT CCGCTTGCCT TCGATGGCCG TTTGCGCGGC
CGCAGCGTGC TGGCCTATCG CGACAGCCAG TCGATTCGCG ACCACTACGC GCTGCAACGG
GAAGTCGGGT ACGGCATCCT CGAGGCCGAT CTGACAGAGT CGACCGTGCT GGCTGTCGGC
TACGACTACC AGGACAAGCA AGTACAAGGC AGCTCCTGGG GCACTGTGCC GTACTGGAAC
GCCGACGGTG GCAAGGCGCG CCTCGGCCGC TCGACCAACA TGGCGACGTC GTGGAGCTCT
TGGCCGATCA AGGACAAGAC AGCATTCGCC ACCCTCGATC AGGCGCTGGC GGGCGGCTGG
CACCTGAAAG CGGCCTACAC CCATCGCCAG AGCGATACCG ACGGCAAGGT CTACTACGGC
GGAACCGGTT TCCCCGCGGA CGACCGCAGC GGGATGGCAG CCTACATGTC GCATATGATC
GGCACGCAGA AGATGAAGAC TTACGACTTC AACGTGTCGG GCCCCTATGC GCTGTTCGGT
CGCGAACACG AAATGATGTT CGGATATGGC GAAGCCGAGC GCAGCGAGCG CTCCCCTTAT
ACGATCGACG GCCCGGTGCC GCCGGGTTAC GGACGGATCC GCGACTGGAA ATACATGGGC
GATATCGCCA GATTCCCCGA CACCGTCACA GGCTTGACCG GCTCCACCTC CAGCACCCGC
CAGAAAGCCG GTTACCTGGC CACACGCCTG AGTTTCACCG ACGACTTGCA CGCGGTACTC
GGCAGCCGTT ACGGCAGCTG GAAAGCGTCA AAAGCCGACA ATACGTTTGA CGACAAGCTG
CAAGTGAGCG CTGTCGACGC GAGCCGCCAG CAACACAACG ACATGTGGAC GCCGTACGCG
GGACTGCTCT ACGACCTGAC GCCCGAGTAC ACCGTGTACG CCAGCTACAC CGACATTTTC
AACCCTCAGG ATTACCGCGA TGCCAATCGC AAATTCCTTG AGCCGGTCGT CGGCAGCAAC
TATGAAATAG GCCTCAAGGG CAGCCTGCTC GACGAGCGCC TGAACCTGGC CACGGCCGTG
TTCTGGAGCA AACAGGACAA TGTCGCCGAA GTTGATGATT CGGTATTACC GGATCCGGTC
ACCGGTGAGG AGTTCTACAA GTCGGGCGGC AAAGGCAACA AGGTCAACGG TTTCGAAGCC
GAGGTTTCGG GTGAAATCCT GGATGGCTGG AACATGACCG CCGGCTACAC CTACACCCAC
TCGGCCAACG GCGAGAAACA ACGCAGCAAC ACCAACCAGC CGTTGAACAT GTTGCGCCTC
TCCACGGCCT ATCGCCTGCC CGGCAACTGG AATGCCCTGA CCGTGGGCGG CGCCGTGAGC
TGGCAGAGTG ACGTCTATGG CAATTCCAAT CGCCCGGTCG GGCGCGGTGC CAATGGGCGG
GTCATCACCG AACGGACCCG GATCAGTCAG GGCGCTTACT CCGTGGTCAA GCTGATGTCG
CGCTACGAGT TCGACAAACA CCTGTCGGCG TCCCTCAACG TCGACAACCT GTTCGACAAG
AAGTATTACG ACAACGTCGG CTTCTACAAC GGCGTGTTCT GGGGCGATCC TCGAACCGTG
ACGCTGGGCC TCGACTGGAA ACTCTGA
|
|---|
| Protein sequence | MFAPITRSMT LTLGLCSVAL SPDLLAETDT EKQLPPATPA LELASTNITA QGLGSTTENT
HAYTTSAMST ATRLNLSFKE TPQSVSVVTR QQMDDFKLGT LTEAMSQTTG VVVQHYDSDR
VNYSSRGYSI NNFQVDGMLN TFSRMKSDSD TIIYDRIEVV RGATGLTTGA GDPSATINMV
RKRPTAQLQA LAGVSGGSYD DYYSYVDVGG PLAFDGRLRG RSVLAYRDSQ SIRDHYALQR
EVGYGILEAD LTESTVLAVG YDYQDKQVQG SSWGTVPYWN ADGGKARLGR STNMATSWSS
WPIKDKTAFA TLDQALAGGW HLKAAYTHRQ SDTDGKVYYG GTGFPADDRS GMAAYMSHMI
GTQKMKTYDF NVSGPYALFG REHEMMFGYG EAERSERSPY TIDGPVPPGY GRIRDWKYMG
DIARFPDTVT GLTGSTSSTR QKAGYLATRL SFTDDLHAVL GSRYGSWKAS KADNTFDDKL
QVSAVDASRQ QHNDMWTPYA GLLYDLTPEY TVYASYTDIF NPQDYRDANR KFLEPVVGSN
YEIGLKGSLL DERLNLATAV FWSKQDNVAE VDDSVLPDPV TGEEFYKSGG KGNKVNGFEA
EVSGEILDGW NMTAGYTYTH SANGEKQRSN TNQPLNMLRL STAYRLPGNW NALTVGGAVS
WQSDVYGNSN RPVGRGANGR VITERTRISQ GAYSVVKLMS RYEFDKHLSA SLNVDNLFDK
KYYDNVGFYN GVFWGDPRTV TLGLDWKL
|
|---|
| |