Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2563 |
Symbol | |
ID | 3714106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2935982 |
End bp | 2938318 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | peptidase S45, penicillin amidase |
Protein accession | YP_348294 |
Protein GI | 77458788 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.387542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.91746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTATTT CCAGGCAATT CACCGGACTG ACCCTTGCCG GCCTGTTTCT CGGGCTGAGT CTGTCGGCGC AGGCGTTCAG CCCGTCCGTT CAGACCGGCG CGGATATCCG TCGCACAGGC TTTGGGGTAC CGCACATTCG CGCGGAAAAC GAACGCGGTC TCGGGTTCGG CATCGGTTAC GCCTATGCGC AGGACAACCT GTGCCTACTG GCCAACGAAA TCGTGACAGT CAATGGCGAG CGGTCGCGGT ACTTCGGGCC GGAGCAATTG ACGGTCGAAG AACGCGAGAA CCGCATCAGC GATGTGTTCT TCCAGTGGCT CAACACCCCG CAGGCGGTGA ATGCCTTCTG GCAGGCGCAG CCGGCCGAGG TGCGTGACCT GGTGGAAGGT TATGCCGCCG GCTACAACCG TTACTTGGCC GAGCGCCGCC AGCAGGGACT GCCGCAACAG TGCCAGGGTG AATGGGTGCG CGATATCGCC GCCGAAGACC TGGTGAAGCT GACCCGTCGA CTGTTGGTCG AGGGCGGTGT CGGTCAGTTC GCCGAAGCGC TGGCGAGTGC GACGCCGCCG CAGGCCATGG CGAACATCGA AAACAATGCG CGGGCATACC AACTGGCCGA CACGCGACTG CAACGCTTCG CACTGGACCG CGGCAGCAAC GCGGTGGCGG TTGGTAGCGA GCGCTCGTTC AATGGCCGCG GCATGTTGCT GGCCAACCCG CATTTTCCGT GGGTCGGCGG CATGCGCTTC TATCAGATGC ACCTGACCAT TCCGGGCAAG CTCGATGTGA TGGGCGCGGC GCTGCCGGGT CTGCCGATGA TCAACATCGG TTTCAACCAG CACCTGGCCT GGACCCACAC CGTCGACTCG TCCAAGCATT TCACCCTGTA TCGCCTGCAA CTCGACCCGA AAGATCCGAC CCGCTATCTG CTTGATGGCC AGTCCTTGCC GCTGAGCAAG CAGACCGTCA CGGTGCAGGT CAAACAGACG GACGGCCAGG TCGTGCCGGT TTCCCGTGAC GTCTACAGCT CACAGTTCGG CCCGATCGTG CAGTGGCCCG GCAAGCTCGA CTGGAACAAT CAGTTCGCCT ATAGCCTGCG CGATGCCAAC CTCGACAATG ACCGGGTGCT GAAGCAGTGG TACGCCATGA ACCGCGCCGG CAATCTCAAG GATCTGCAGG ATTCGGTGCA CACGATCCAG GGCATCCCGT GGGTCAACAC CCTGGCGGTG GATGACAAGG GCCAGACGCT GTACATGAAC CTGTCAGTGG TGCCGAACGT CAGTACCGAC AAACTGGCCA GGTGCAGCGA CCCGCGCGCC GGTCTGAAAA TGATCGTGCT CGACGGTTCC AACAGCGCTT GCGCCTGGGA CATCGACCCG CACGCCGCGC AAAAGGGCAT CTACGCGTCC AGCCAACTAC CGCAGCTGTT GCGCAAGGAC TTCGTCCAGC ACTCCAACGA CTCGGCCTGG CTGGCCAACC CGGCGCAACC GCTGACCGGT TTCTCGCCGC TGATCAGTCA GGACGGTCAG CCTCTGGGCC TGCGCTCGCG CTTTGCGCTG GATCGTCTGG CGACCCTGAG CAAGAAAGGC CTGGTGTCGG TGCAGGACCT GCAACACATG GTGATGGACG ATCAGGTGTT CCTGGCGACT CAGGTAGTAC CGGATTTGTT GAAGTTCTGC ACTTCCCAGT CTGAAGCCGC GTTGAAATCG GTGTGCAGCA GCCTGAAAGC GTGGGACGGC CGGGCGAATC TGGAGTCGGG CGTTGGCCTG GTGCATTTCC AGAGCATCAT GCAAGCGATG CAGGAATCGC CGCAGGCCTG GCGCGTGGCA TTCGATCCGA AGGATGCGCA ACACACACCG CGCGGGCTGG CTATTGAAAA GCCGGAAGTG GCCAAGGCAC TGCGCGAGGC CATGCTGGCG TCGGCCGAAA TTGCCGCCAA AATGGGCCTG ACCGAGAAAA CCCGTTGGGG TGATGTGCAG GTGGTCAGCA GTGGCGGCCA GCAAACGCCG ATTCACGGTG GCCCGGGTAC GCTGGGCATC TACAACGCTA TCCAGAGCGT GCCCCGTGAA GATGGCAAGC TGGAGGTGGT CAGCGGCACC AGTTACCTGC AAGTCGTCAC GTTCGACGAC AAGGGGCCGC ATGCTCAGGG CCTGCTGGCG TTCTCGCTGT CCAGCGATCC GGCGTCGAAG TATTCCCGCG ACCAGACCGA GGCGTTCTCG AAGAAACAAT GGAGCGTGTT GCCGTTCACC GAGCAGCAGA TCAAGGCTGA TCCGCAGTAT CAGGTGCAGA CCGTACGCGA TGATCTGGAA AAAACGGGGA AAGTGGCGGC GCAGTAA
|
Protein sequence | MTISRQFTGL TLAGLFLGLS LSAQAFSPSV QTGADIRRTG FGVPHIRAEN ERGLGFGIGY AYAQDNLCLL ANEIVTVNGE RSRYFGPEQL TVEERENRIS DVFFQWLNTP QAVNAFWQAQ PAEVRDLVEG YAAGYNRYLA ERRQQGLPQQ CQGEWVRDIA AEDLVKLTRR LLVEGGVGQF AEALASATPP QAMANIENNA RAYQLADTRL QRFALDRGSN AVAVGSERSF NGRGMLLANP HFPWVGGMRF YQMHLTIPGK LDVMGAALPG LPMINIGFNQ HLAWTHTVDS SKHFTLYRLQ LDPKDPTRYL LDGQSLPLSK QTVTVQVKQT DGQVVPVSRD VYSSQFGPIV QWPGKLDWNN QFAYSLRDAN LDNDRVLKQW YAMNRAGNLK DLQDSVHTIQ GIPWVNTLAV DDKGQTLYMN LSVVPNVSTD KLARCSDPRA GLKMIVLDGS NSACAWDIDP HAAQKGIYAS SQLPQLLRKD FVQHSNDSAW LANPAQPLTG FSPLISQDGQ PLGLRSRFAL DRLATLSKKG LVSVQDLQHM VMDDQVFLAT QVVPDLLKFC TSQSEAALKS VCSSLKAWDG RANLESGVGL VHFQSIMQAM QESPQAWRVA FDPKDAQHTP RGLAIEKPEV AKALREAMLA SAEIAAKMGL TEKTRWGDVQ VVSSGGQQTP IHGGPGTLGI YNAIQSVPRE DGKLEVVSGT SYLQVVTFDD KGPHAQGLLA FSLSSDPASK YSRDQTEAFS KKQWSVLPFT EQQIKADPQY QVQTVRDDLE KTGKVAAQ
|
| |