Gene Pfl01_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2563 
Symbol 
ID3714106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2935982 
End bp2938318 
Gene Length2337 bp 
Protein Length778 aa 
Translation table11 
GC content62% 
IMG OID 
Productpeptidase S45, penicillin amidase 
Protein accessionYP_348294 
Protein GI77458788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.387542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.91746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTATTT CCAGGCAATT CACCGGACTG ACCCTTGCCG GCCTGTTTCT CGGGCTGAGT 
CTGTCGGCGC AGGCGTTCAG CCCGTCCGTT CAGACCGGCG CGGATATCCG TCGCACAGGC
TTTGGGGTAC CGCACATTCG CGCGGAAAAC GAACGCGGTC TCGGGTTCGG CATCGGTTAC
GCCTATGCGC AGGACAACCT GTGCCTACTG GCCAACGAAA TCGTGACAGT CAATGGCGAG
CGGTCGCGGT ACTTCGGGCC GGAGCAATTG ACGGTCGAAG AACGCGAGAA CCGCATCAGC
GATGTGTTCT TCCAGTGGCT CAACACCCCG CAGGCGGTGA ATGCCTTCTG GCAGGCGCAG
CCGGCCGAGG TGCGTGACCT GGTGGAAGGT TATGCCGCCG GCTACAACCG TTACTTGGCC
GAGCGCCGCC AGCAGGGACT GCCGCAACAG TGCCAGGGTG AATGGGTGCG CGATATCGCC
GCCGAAGACC TGGTGAAGCT GACCCGTCGA CTGTTGGTCG AGGGCGGTGT CGGTCAGTTC
GCCGAAGCGC TGGCGAGTGC GACGCCGCCG CAGGCCATGG CGAACATCGA AAACAATGCG
CGGGCATACC AACTGGCCGA CACGCGACTG CAACGCTTCG CACTGGACCG CGGCAGCAAC
GCGGTGGCGG TTGGTAGCGA GCGCTCGTTC AATGGCCGCG GCATGTTGCT GGCCAACCCG
CATTTTCCGT GGGTCGGCGG CATGCGCTTC TATCAGATGC ACCTGACCAT TCCGGGCAAG
CTCGATGTGA TGGGCGCGGC GCTGCCGGGT CTGCCGATGA TCAACATCGG TTTCAACCAG
CACCTGGCCT GGACCCACAC CGTCGACTCG TCCAAGCATT TCACCCTGTA TCGCCTGCAA
CTCGACCCGA AAGATCCGAC CCGCTATCTG CTTGATGGCC AGTCCTTGCC GCTGAGCAAG
CAGACCGTCA CGGTGCAGGT CAAACAGACG GACGGCCAGG TCGTGCCGGT TTCCCGTGAC
GTCTACAGCT CACAGTTCGG CCCGATCGTG CAGTGGCCCG GCAAGCTCGA CTGGAACAAT
CAGTTCGCCT ATAGCCTGCG CGATGCCAAC CTCGACAATG ACCGGGTGCT GAAGCAGTGG
TACGCCATGA ACCGCGCCGG CAATCTCAAG GATCTGCAGG ATTCGGTGCA CACGATCCAG
GGCATCCCGT GGGTCAACAC CCTGGCGGTG GATGACAAGG GCCAGACGCT GTACATGAAC
CTGTCAGTGG TGCCGAACGT CAGTACCGAC AAACTGGCCA GGTGCAGCGA CCCGCGCGCC
GGTCTGAAAA TGATCGTGCT CGACGGTTCC AACAGCGCTT GCGCCTGGGA CATCGACCCG
CACGCCGCGC AAAAGGGCAT CTACGCGTCC AGCCAACTAC CGCAGCTGTT GCGCAAGGAC
TTCGTCCAGC ACTCCAACGA CTCGGCCTGG CTGGCCAACC CGGCGCAACC GCTGACCGGT
TTCTCGCCGC TGATCAGTCA GGACGGTCAG CCTCTGGGCC TGCGCTCGCG CTTTGCGCTG
GATCGTCTGG CGACCCTGAG CAAGAAAGGC CTGGTGTCGG TGCAGGACCT GCAACACATG
GTGATGGACG ATCAGGTGTT CCTGGCGACT CAGGTAGTAC CGGATTTGTT GAAGTTCTGC
ACTTCCCAGT CTGAAGCCGC GTTGAAATCG GTGTGCAGCA GCCTGAAAGC GTGGGACGGC
CGGGCGAATC TGGAGTCGGG CGTTGGCCTG GTGCATTTCC AGAGCATCAT GCAAGCGATG
CAGGAATCGC CGCAGGCCTG GCGCGTGGCA TTCGATCCGA AGGATGCGCA ACACACACCG
CGCGGGCTGG CTATTGAAAA GCCGGAAGTG GCCAAGGCAC TGCGCGAGGC CATGCTGGCG
TCGGCCGAAA TTGCCGCCAA AATGGGCCTG ACCGAGAAAA CCCGTTGGGG TGATGTGCAG
GTGGTCAGCA GTGGCGGCCA GCAAACGCCG ATTCACGGTG GCCCGGGTAC GCTGGGCATC
TACAACGCTA TCCAGAGCGT GCCCCGTGAA GATGGCAAGC TGGAGGTGGT CAGCGGCACC
AGTTACCTGC AAGTCGTCAC GTTCGACGAC AAGGGGCCGC ATGCTCAGGG CCTGCTGGCG
TTCTCGCTGT CCAGCGATCC GGCGTCGAAG TATTCCCGCG ACCAGACCGA GGCGTTCTCG
AAGAAACAAT GGAGCGTGTT GCCGTTCACC GAGCAGCAGA TCAAGGCTGA TCCGCAGTAT
CAGGTGCAGA CCGTACGCGA TGATCTGGAA AAAACGGGGA AAGTGGCGGC GCAGTAA
 
Protein sequence
MTISRQFTGL TLAGLFLGLS LSAQAFSPSV QTGADIRRTG FGVPHIRAEN ERGLGFGIGY 
AYAQDNLCLL ANEIVTVNGE RSRYFGPEQL TVEERENRIS DVFFQWLNTP QAVNAFWQAQ
PAEVRDLVEG YAAGYNRYLA ERRQQGLPQQ CQGEWVRDIA AEDLVKLTRR LLVEGGVGQF
AEALASATPP QAMANIENNA RAYQLADTRL QRFALDRGSN AVAVGSERSF NGRGMLLANP
HFPWVGGMRF YQMHLTIPGK LDVMGAALPG LPMINIGFNQ HLAWTHTVDS SKHFTLYRLQ
LDPKDPTRYL LDGQSLPLSK QTVTVQVKQT DGQVVPVSRD VYSSQFGPIV QWPGKLDWNN
QFAYSLRDAN LDNDRVLKQW YAMNRAGNLK DLQDSVHTIQ GIPWVNTLAV DDKGQTLYMN
LSVVPNVSTD KLARCSDPRA GLKMIVLDGS NSACAWDIDP HAAQKGIYAS SQLPQLLRKD
FVQHSNDSAW LANPAQPLTG FSPLISQDGQ PLGLRSRFAL DRLATLSKKG LVSVQDLQHM
VMDDQVFLAT QVVPDLLKFC TSQSEAALKS VCSSLKAWDG RANLESGVGL VHFQSIMQAM
QESPQAWRVA FDPKDAQHTP RGLAIEKPEV AKALREAMLA SAEIAAKMGL TEKTRWGDVQ
VVSSGGQQTP IHGGPGTLGI YNAIQSVPRE DGKLEVVSGT SYLQVVTFDD KGPHAQGLLA
FSLSSDPASK YSRDQTEAFS KKQWSVLPFT EQQIKADPQY QVQTVRDDLE KTGKVAAQ