Gene Pfl01_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2542 
Symbol 
ID3714085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2908245 
End bp2909003 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID 
ProductLmbE-like protein 
Protein accessionYP_348273 
Protein GI77458767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.439463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA ATCCGATCGT CGGCGAAGGA ACCTCCCTCC ACGAATGGCA GGGCTCACGC 
CATCTGGCAG CGGTGGACAG CATCGACATT CTCGATTTGG TACCACCGGG ATCGCGAGCG
GTGGTGATTG CGCCGCACCC CGACGATGAA GTGCTCGGTT GCGGCGGACT GTTGCAAGCG
CTCGCAGCGG CGGGACGCAC CCTGCAATTG ATCTCGGTCA CCGATGGCAG CGCCAGTCAT
CCAGGTTCGG AGCGCTGGCC GGTGGAACGT CTGAGCGTCG TGCGCCCGCA GGAATCCGCT
GAAGCCCTGC GCCGCCTCGG CCTTCCCATG CACCAGTTGC AGTGGCTGCG CGGCGGCTTC
CCCGACACTC AGGTCGCCGC GCGCGAGTCG ATGCTGTGCC AATACCTGAC CCGCTACCTG
CAACCCGAAG ACGTGGTTTT CACTACTTGG CGCGAGGACG GTCACAGCGA CCACGAGGCC
GTGGGCCGCG CCAGCGTCGA AGCGGCGCGG CGCGTGGGCG CGATTTGCCA CGAACTGCCG
GTCTGGACCT GGCACTGGGC AACCCCGGAA GACGCCATCG TGCCCTGGGA ACGGGCGCGC
AAAATCCTGC TCAGTCCGGA GCAGGTAGCA CGCAAACGCC ATGCGGTGCA CGCCTTCGCC
AGCCAGCTGG AAGGCGATCC CGAAGCGGGC CTGGCCCCGG TGCTCAAACC CTATGTCATC
GATCGACTGC TGCAACCGTT CGAGGTGGTC TTTCTATGA
 
Protein sequence
MKRNPIVGEG TSLHEWQGSR HLAAVDSIDI LDLVPPGSRA VVIAPHPDDE VLGCGGLLQA 
LAAAGRTLQL ISVTDGSASH PGSERWPVER LSVVRPQESA EALRRLGLPM HQLQWLRGGF
PDTQVAARES MLCQYLTRYL QPEDVVFTTW REDGHSDHEA VGRASVEAAR RVGAICHELP
VWTWHWATPE DAIVPWERAR KILLSPEQVA RKRHAVHAFA SQLEGDPEAG LAPVLKPYVI
DRLLQPFEVV FL