| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2525 |
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| Symbol | |
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| ID | 3712098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 2887213 |
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| End bp | 2889294 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_348256 |
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| Protein GI | 77458750 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATCG GTAGCTATTC CTTCACGCTG GTTTTCATTT CGCTGTGTGT GGCGATCCTC
GCTTCCTACA CCGCGCTCGA TCTCACCGGG CGCATTGCCA CTGCCAAGGG CCGCGCCGTG
CATTTATGGA CGGCCGGCGG CGCGTTTGCC ATGGGCATCG GCGTCTGGTC GATGCACTTC
ATTGGCATGC TGGCGTTCAA GCTGCCGATC AGCCTCGGTT ACGACATTTC AATCACCGCG
CTCTCATTGC TGATCGCCGT GCTGTCCTGC GGTTTTGCCC TGTGGCTGGT CAGTCAGCCG
AAACTGCCGG CCTGGCAACT GGCCTTTGGC GCGTTGATCA TGGGCGCCGG CATCAGCGCC
ATGCATTACA CCGGCATGGC CGCGATGCGC ATGCAGCCGG GCATCGACTA CGATCCGACG
CTGTTTGGCG CCTCGCTGTT GATCGCCGTT GGCGCCTCGG CAGCAGCGTT GTGGATTGCC
TTCCGTCTGC GTCAGCATTC GCCTTACGTG CGGCTGTTCC GTGCCGGGGC GGCGATTGTC
ATGGGCGTGG CGATTGTCGG CATGCACTAC ACCGGGATGG CGGCGGCGCG GTTTCCCGAC
GGCAGTTTCT GTGGTGCGGC GCTCAGTGGC CTGAACGGCA ACGGCCTCGA CAATCTGGTG
CTGATCACCA CGCTGGCGGT GCTGGCCATC GCGCTGCTGA CCTCGATTCT CGATGCGCGT
CTGGAAGCCC GCACGGCTGA TCTGGCCCAT TCGTTGACCG TGGCCAACCG CGAACTCACC
CAACTGGCCC TGCACGACCC CTTGACCGGC CTGCCGAACC GGATGTTGCT GGACGACCGG
ATCAATCAGG CGATGAAAAA GGTCAATGAG CAGGGCGGCT GCTTTGCGCT GATGTTTATC
GATCTGGACG GCTTCAAACC GGTCAATGAC GCTTTCGGTC ACCACATGGG GGACCAGTTG
CTGCGCGAAG TGGCGGTGCG CTTGCGTGAA GATTTGCGCA GCCTCGACAC GCTGGCGCGG
ATCGGCGGCG ACGAGTTTGT CCTGCTGGTG CGCCTGGCCG AACCCAACGA TGCACTGGGC
CTGGCGGCAC GTCAGGTCGG CCTGATCGCA CAGTCGTTCC GGGTCGCCGA ACATGACCTG
CAGATTTCTG CCAGCGTCGG CATCGCCCTG TACCCCGGCA ACGGGGAGAG CGCCCAGGAA
CTGTTGATGA ACGCCGACGC CGCGATGTAC CACGCCAAGG GCGGCGGCAA GAATGGTTAC
AGCTTCTTCG ACGTTTCGAT GAACAGTAAC GCGCGCAAGC AATTGCAACT GTTGCAGGAC
CTGCGGGCAG CACTGGAGCA CAGCGAGTTT TGTCTGCATT ACCAACCCAA ATTCCACGCC
GCTGACGGTC ACCCGGTCGG TGCCGAAGCG TTGTTGCGCT GGGAGCATCC AGTTCACGGC
ATGCTGATGC CGGACACGTT CATCGATCTG GCAGAGAAAA CCGGTCTGAT CATTCCGATT
GGCGAGTGGG TGCTCAACGA AGCCTGCCGG CAGATGCGCG AGTGGTATGT ACTGGGCCAC
ACCGAATGGC GGATCGCGGT GAACCTGTCA GCGTTGCAGT TCTGCCACGC CGGACTGGTG
CGCAGCGTAG CCAAGGCCCT GGCCACCCAC CATTTGCCGG CCAACAGCCT GACCCTGGAA
ATCACCGAAA CCACCGCCAT GAGCGACGCC GATGCGAGCA TGACGGTGTT GCAGGAGCTG
TCCGACATGG GCGTCGATCT GTCCATCGAC GATTTTGGCA CGGGCTATTC CAGCCTGATG
TATCTCAAGC GCCTGCCGGC CAACGAGCTG AAGATTGATC GCGGTTTCGT CCGTGATCTG
GAACATGACA GCGACGATGC GGCGATCGTT TCGGCAATCG TCGCCCTGGG TCAGGCGCTC
GGTCTGCGCA TCGTGGCTGA AGGAGTGGAG ACCGACTCGC AACAGGACTT CCTCACGCAA
CTGGGCTGCG ATTCGCTGCA AGGTTATCTG CTCGGTCACC CGATGCCGGC GGATCGCTTT
CTGCAGAATG TCGCGCGCGG CAAACCATTG GCGGTGAGCT GA
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| Protein sequence | MLIGSYSFTL VFISLCVAIL ASYTALDLTG RIATAKGRAV HLWTAGGAFA MGIGVWSMHF
IGMLAFKLPI SLGYDISITA LSLLIAVLSC GFALWLVSQP KLPAWQLAFG ALIMGAGISA
MHYTGMAAMR MQPGIDYDPT LFGASLLIAV GASAAALWIA FRLRQHSPYV RLFRAGAAIV
MGVAIVGMHY TGMAAARFPD GSFCGAALSG LNGNGLDNLV LITTLAVLAI ALLTSILDAR
LEARTADLAH SLTVANRELT QLALHDPLTG LPNRMLLDDR INQAMKKVNE QGGCFALMFI
DLDGFKPVND AFGHHMGDQL LREVAVRLRE DLRSLDTLAR IGGDEFVLLV RLAEPNDALG
LAARQVGLIA QSFRVAEHDL QISASVGIAL YPGNGESAQE LLMNADAAMY HAKGGGKNGY
SFFDVSMNSN ARKQLQLLQD LRAALEHSEF CLHYQPKFHA ADGHPVGAEA LLRWEHPVHG
MLMPDTFIDL AEKTGLIIPI GEWVLNEACR QMREWYVLGH TEWRIAVNLS ALQFCHAGLV
RSVAKALATH HLPANSLTLE ITETTAMSDA DASMTVLQEL SDMGVDLSID DFGTGYSSLM
YLKRLPANEL KIDRGFVRDL EHDSDDAAIV SAIVALGQAL GLRIVAEGVE TDSQQDFLTQ
LGCDSLQGYL LGHPMPADRF LQNVARGKPL AVS
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