Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2480 |
Symbol | |
ID | 3715260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2835316 |
End bp | 2835912 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_348211 |
Protein GI | 77458705 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.688785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAGTGA CCAAGGCCCA GGCACAGGCC AATCGAGAAC ACATCGTTGA AACAGCCTCA GAGCTGTTCC GTGAGCGTGG CTTTGATGGC GTCGGTGTGG CCGATCTCAT GGCGGCTGCC GGTTTCACCC ATGGAGGCTT CTACAAGCAC TTCGGCTCGA AGGCCGACCT GATGGCCGAA GCCTCGGCCT GCAGTCTTGG CAAATCGTTG ACCGGCGCCC AGGCGCTCGA CGTACCAGGT TTCATCAACG TCTACGTGAA CAGAGAACAT CGCGACGGAC GCGGCAGCGG TTGCACGATG GCCGCACTGT GTGGCGACGC GGCGCGTCAG TCGGACGATG TGAAGGCAAC GTTTGCCGCA GGCATTGAAC AGATCCTGCA AACCCTGGCG GAAAAATATC CTGTGGGCAC GGATGCCGCA GAGGGCGAGG GGAGAAAGAA AATGATCGAC CTGCTGTCGC GGGCGGTCGG CGCGATCGTC CTGTCACGCG CTTGCCCGGA TGATTCGGCA TTGGCGGACG AAATTCTTGA GGTTTGCCGC GCTGAAATGT TTGCTTCATT ACCGGTGCTG CCGGTCGATC AAGTGGAAAC ACCGTAG
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Protein sequence | MRVTKAQAQA NREHIVETAS ELFRERGFDG VGVADLMAAA GFTHGGFYKH FGSKADLMAE ASACSLGKSL TGAQALDVPG FINVYVNREH RDGRGSGCTM AALCGDAARQ SDDVKATFAA GIEQILQTLA EKYPVGTDAA EGEGRKKMID LLSRAVGAIV LSRACPDDSA LADEILEVCR AEMFASLPVL PVDQVETP
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