Gene Pfl01_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2480 
Symbol 
ID3715260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2835316 
End bp2835912 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content60% 
IMG OID 
ProductTetR family transcriptional regulator 
Protein accessionYP_348211 
Protein GI77458705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.688785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGTGA CCAAGGCCCA GGCACAGGCC AATCGAGAAC ACATCGTTGA AACAGCCTCA 
GAGCTGTTCC GTGAGCGTGG CTTTGATGGC GTCGGTGTGG CCGATCTCAT GGCGGCTGCC
GGTTTCACCC ATGGAGGCTT CTACAAGCAC TTCGGCTCGA AGGCCGACCT GATGGCCGAA
GCCTCGGCCT GCAGTCTTGG CAAATCGTTG ACCGGCGCCC AGGCGCTCGA CGTACCAGGT
TTCATCAACG TCTACGTGAA CAGAGAACAT CGCGACGGAC GCGGCAGCGG TTGCACGATG
GCCGCACTGT GTGGCGACGC GGCGCGTCAG TCGGACGATG TGAAGGCAAC GTTTGCCGCA
GGCATTGAAC AGATCCTGCA AACCCTGGCG GAAAAATATC CTGTGGGCAC GGATGCCGCA
GAGGGCGAGG GGAGAAAGAA AATGATCGAC CTGCTGTCGC GGGCGGTCGG CGCGATCGTC
CTGTCACGCG CTTGCCCGGA TGATTCGGCA TTGGCGGACG AAATTCTTGA GGTTTGCCGC
GCTGAAATGT TTGCTTCATT ACCGGTGCTG CCGGTCGATC AAGTGGAAAC ACCGTAG
 
Protein sequence
MRVTKAQAQA NREHIVETAS ELFRERGFDG VGVADLMAAA GFTHGGFYKH FGSKADLMAE 
ASACSLGKSL TGAQALDVPG FINVYVNREH RDGRGSGCTM AALCGDAARQ SDDVKATFAA
GIEQILQTLA EKYPVGTDAA EGEGRKKMID LLSRAVGAIV LSRACPDDSA LADEILEVCR
AEMFASLPVL PVDQVETP