| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2433 |
|---|
| Symbol | |
|---|
| ID | 3715329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 2786597 |
|---|
| End bp | 2787394 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter-like |
|---|
| Protein accession | YP_348164 |
|---|
| Protein GI | 77458658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0814206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.123252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGC GCCTCAAACA GGCTTTTCTG CACCACACCA ATGGCGTGGA GGCCTTGCGC
GGCGTCGATT TGCAGATCGA GGCCGGCGAA CAGGTGGCGA TCATCGGCCC GTCCGGCGCC
GGCAAATCCA GCCTGCTGAA TATGCTGGCG ACCGCCATTC GGCCCAGCAG CGGCGACATC
GAAGTGCTGG GCGAGCGCGC CTGGCACTTG TCCGCCCGCC AACGGCAACG CCTGCGTGCG
CGCATCGGTC TGGTGCATCA GGCGCCGCCG CTGCCGCCCC GGCAACGGGT GGTGACGGCG
GTGCTGGCCG GCAAACTCGG CCAATGGAGC CTGGGCAAAA GCCTGATCAA CCTGCTGCAC
CCGCTCGACG TGCCCGGCGC TCGCGCCGCT CTGGCAAAAC TGGATCTGGC CGACAAACTC
TTCAGCCAAT GCCAGCAACT GTCCGGCGGG CAATTGCAGC GGGTCGGCAT CGCCCGCGTG
CTGTACCAGG CGCCGGAAGT GTTGCTGGCG GATGAGCCGG TCTCGGCGAT GGACCCGGTG
CTGGCCGGGC ACACGCTGTC GATCCTGTCG CGCCATGCTC GCGAGCACAA CGTCACGTTG
GTGGCGAGCC TGCACGCGGT GGAACTGGCG CTGGCGCACT TCCCGCGCAT CGTCGGTTTG
CGCGAGGGCC GGATCCTGTT CGACTGCCCG TCCGCGCAAG TCAGCCGCGA CATGCTCGAC
ACCCTCTACG CCAACGAACA ACTGCAATCC CCGGCGCCCG CCGTCACTCC ACTGATTGTG
CAGATTCCGC GATGCTGA
|
|---|
| Protein sequence | MTLRLKQAFL HHTNGVEALR GVDLQIEAGE QVAIIGPSGA GKSSLLNMLA TAIRPSSGDI
EVLGERAWHL SARQRQRLRA RIGLVHQAPP LPPRQRVVTA VLAGKLGQWS LGKSLINLLH
PLDVPGARAA LAKLDLADKL FSQCQQLSGG QLQRVGIARV LYQAPEVLLA DEPVSAMDPV
LAGHTLSILS RHAREHNVTL VASLHAVELA LAHFPRIVGL REGRILFDCP SAQVSRDMLD
TLYANEQLQS PAPAVTPLIV QIPRC
|
|---|
| |