Gene Pfl01_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2406 
Symbol 
ID3715399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2765158 
End bp2766099 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content57% 
IMG OID 
ProductNmrA-like 
Protein accessionYP_348138 
Protein GI77458633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00937335 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAAG TCATACCGCT TTCCCCCCAA TCGATTCTCG TACTGGGCGC CGGCGAACTC 
GGCCTGCCGG TTTTGCGCAA TCTCGCACAG GTCGCAAAAC GCGCACCCGG TTCCACAATC
AGTGTCCTTC TCAGAGCCTC AACCATCGGT ACTCAGGTGC CCGAGAAAAA GGCAGAAATC
GATGAGCTGC GGAGTCTGGG TATTCAAATG GTCGCCGCCG ATCTGGTGAG CGATTCGATC
GATCAACTGG CTGAAGTTTT CGCACGATTC GATACCGTCA TCGGCTGTGC AGGCATGGTC
GCGGGTCGGG AAACGCCGAT GAAGCTTGCC ACCGCAGCGC TCAAGGCCGG CGTGAAGCGC
TACTTCCCAT GGCAGTTTGG TGTGGATTTC GAAGTGATCG GGCGAGGCAG TCCTCAGGAC
CTGTTTGATG CTCAGCTCGA TGTGCGCGAG TTGCTTCGCG CCCAGGATAA AACCGAGTGG
GTCATCATCT CGACGGGCAT GTTCACCAGT TTCCTGTTCG AGCCGGTATT TGAGGTCGTG
GACTTCGACA ACGACGCCGT GAACGCATTG GGCAGTCTCG ACAACAGCGT GACGCTCACG
ACACCGCGAG ACATCGGCAG GTTGACCGCC GAAATCGTCT TCTTCGAACC TCGTTTTCGC
AATCAGATCG TCTACCTTTC CGGTGACACC GTGACCTACG GACAAGTGGC GAGCATCCTT
GAACGGGTGC TGGAACGTCC GTTCAAACGC AACGTCTGGA CTGTCGAGCA CCTGATCCTG
GAACTCGAAA AAGATCCCAC CCACCACATC AAAAAGTATC GCGCCGTGTT TGCACAAGGC
AGAGGCGTGG CCTGGCCGAA AGCTGGCACG TTCAACGAGC AGCAATCCAT TCAGGTCACC
AGCGCAGAAC AGTGGGTTCG AGAAAACCTC GCAGGCGACT GA
 
Protein sequence
MTEVIPLSPQ SILVLGAGEL GLPVLRNLAQ VAKRAPGSTI SVLLRASTIG TQVPEKKAEI 
DELRSLGIQM VAADLVSDSI DQLAEVFARF DTVIGCAGMV AGRETPMKLA TAALKAGVKR
YFPWQFGVDF EVIGRGSPQD LFDAQLDVRE LLRAQDKTEW VIISTGMFTS FLFEPVFEVV
DFDNDAVNAL GSLDNSVTLT TPRDIGRLTA EIVFFEPRFR NQIVYLSGDT VTYGQVASIL
ERVLERPFKR NVWTVEHLIL ELEKDPTHHI KKYRAVFAQG RGVAWPKAGT FNEQQSIQVT
SAEQWVRENL AGD