Gene Pfl01_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2404 
Symbol 
ID3715397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2764258 
End bp2764734 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content50% 
IMG OID 
Producthemerythrin HHE cation binding region 
Protein accessionYP_348136 
Protein GI77458631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00792518 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCCA TCGACCTTCT GAAAACTGAC CACGAAAAAG TTAAAGGCAT TCTGAATCAA 
CTCAGTGAAT CCACCGATCG CGCATTAAAA AAGCGTGCGG AGTTGCTGGA CAAGCTTGAA
CTGGAAATTA CCATTCATAC TCAGCTCGAG GAGCAGATTC TGTATCCGGC TTTCAAGGAG
GCAGGCGATA AGGAACAGGA TGAGATGTAC TACGAGGCGA AAGAAGAACA CCGCACGGTA
GATTCACTGG TATTGCCTGA CCTGAAATCC ACCGATCCTT CTACACCTGA GTTTGCCGGC
CGCGTGAAGG TGGTCAAAGA GCTTCTGGAA CACCATATTG AGGAAGAGGA AACTGAGATG
TTTCCTCAGG CCAGAAAGCT GCTGGGCAAG GCAAAGCTCG AGGAGCTGGG CAAGGAAATG
GAAGTGATGA AGGCTTCACT TAAGAAAAGC CTCGGCGGGG CGAATATGGC AGCCTGA
 
Protein sequence
MNAIDLLKTD HEKVKGILNQ LSESTDRALK KRAELLDKLE LEITIHTQLE EQILYPAFKE 
AGDKEQDEMY YEAKEEHRTV DSLVLPDLKS TDPSTPEFAG RVKVVKELLE HHIEEEETEM
FPQARKLLGK AKLEELGKEM EVMKASLKKS LGGANMAA