Gene Pfl01_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2389 
Symbol 
ID3715441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2749081 
End bp2749677 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content64% 
IMG OID 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_348121 
Protein GI77458616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000372356 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATCGT TGTTGCCTTT TCTGCTGTTT TCCTTCGTCG CCTCGATCAC CCCGGGACCG 
ACCAATATTC TGGTGATGAG CCACAGCTCG CGGCGCGGTC TGACGGCCAC CGTGCCGATC
ATCTTCGGTG CCTGTGTGTC GGCGGCGCTG GTGGTGTTGG TGGTCGGACT CGGCGTGGGA
GAAACCTTGT TGCGCTATCC CCTTGTGCAG CAGGCGATGG CCTGGGCCGG GGTGTTGTGG
CTGAGCTGGC TGGCGTGGCA GATCTTTCGC AGCACGCCGC CGTCGCTGGA CTCGGCGACA
GCGGCTGATG ACGGCTTCAG CGTGTTCGGC GCCGCCGGCC TGCAATTGAT CAACCCCAAG
GTGTGGATGA TGGCCGTGGC GGTGGTGAGC GTGTTTGGCG GGAACGGTGA CGAGAGTGCG
CGGATGCTGC TGTTGTCGGC GGTTTTTCTA ATGGTCTGCC TGCCGTGCAT GACGGCGTGG
GCGCTGCTGG GCGTGGGCAG CGCGCGGTTC TTTGGCTCGC CACGGGCGTT TCGGCGCATG
AATGCCGTGC TGGCGGTTTT GTTGTTGCTG TCGGCCTGGT TGGCGGTGTT GGTCTAG
 
Protein sequence
MESLLPFLLF SFVASITPGP TNILVMSHSS RRGLTATVPI IFGACVSAAL VVLVVGLGVG 
ETLLRYPLVQ QAMAWAGVLW LSWLAWQIFR STPPSLDSAT AADDGFSVFG AAGLQLINPK
VWMMAVAVVS VFGGNGDESA RMLLLSAVFL MVCLPCMTAW ALLGVGSARF FGSPRAFRRM
NAVLAVLLLL SAWLAVLV