| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2335 |
|---|
| Symbol | |
|---|
| ID | 3715520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2694579 |
|---|
| End bp | 2695388 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | NLPA lipoprotein |
|---|
| Protein accession | YP_348067 |
|---|
| Protein GI | 77458562 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.209584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAA AAGCAGGCTT GACCCTGGCC GTCCTCGGCG CGCTGGTGAC TTCGTTCAGT
GCCCAGGCGC TCGAACCATT GCGCGTTGCA GCGGACCCGG TGCCACACGC GCAGATCCTG
ACGTACATCC AAAAGCTCGA TCCACAGCTC AATCTCAAGG TGATCGAAAT CCCGCAGGGC
GTGAACTCCA ACGAACTTTT GGTGCACGGC GATGTGGACG CCAACTACTT CCAGCATCTG
CCGTACCTGC AATCCCAGGA AAAGGCCCTC GGCGAAAAAC TCGCGGTGGC CGCCACGGTG
CACATTGAAC CGCTGGGCAT TTATTCCCAC CGCCACAAAA CCTTCGCCCA GGTGCCGGAC
AGAGGCACGG TCGCGGTGCC GAACAACGTC ACCAACCTGA GCCGTGCGCT GTACCTTTTG
CAGGACAACG GCCTGATCAA ACTCAAGCCT GGCTTCAATG ACCCGGCGGC CGATCAGGCG
ACACCCAAGG ACATCGCCGA AAACCCGAAA CAGCTGAAGA TCCTCGAAAT CGAATCGCCG
CAACTGCCCC GTGCGCTGGA TGACGTGGAC CTGGCGGTGA TCAACGGCAA CTACGCGCTG
GAAGCCGGGC TGGTGCCGGC CAGGGATGCG CTGGGGCTGG AGAAGGCCGA GCACAACCCG
TACGCCAACA TTCTGGTGAC CACGCCGAAA CTGGAAAACG ATCCGCGCAT TCAGCAATTG
GCCAAGGACC TGACCTCGCC GCAAGTCGCC AAATACATCG CCGAGAACTT CAAGGGTTCG
GTGATCCCGG TGGCGGATGC CAAGCCATGA
|
|---|
| Protein sequence | MLKKAGLTLA VLGALVTSFS AQALEPLRVA ADPVPHAQIL TYIQKLDPQL NLKVIEIPQG
VNSNELLVHG DVDANYFQHL PYLQSQEKAL GEKLAVAATV HIEPLGIYSH RHKTFAQVPD
RGTVAVPNNV TNLSRALYLL QDNGLIKLKP GFNDPAADQA TPKDIAENPK QLKILEIESP
QLPRALDDVD LAVINGNYAL EAGLVPARDA LGLEKAEHNP YANILVTTPK LENDPRIQQL
AKDLTSPQVA KYIAENFKGS VIPVADAKP
|
|---|
| |