Gene Pfl01_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2281 
Symbol 
ID3715622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2632214 
End bp2633137 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content62% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_348013 
Protein GI77458508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCA AACGACTGTC ACACCTTCTC GCCCTGGCCG ATGAACGCCA TTTCGGTCGC 
GCCGCCGAGC GCGTGCACCT CAGCCAGCCG GCCCTGAGCC GCAGCATTCA GGCGCTGGAA
AGCGAAACCG GGCAGCGCCT GTTCGACCGC GACACCGGCG ACGTCCGCCC GACACCGGCG
GGGGTCTTTC TGATCGAGCG GGCGCGACGG TTGCTGTTCG ATGCCCGTTC GCTGGAGCGC
GACATGACGC TCTACAGCGA TCGCCAACTG GGCAGCCTCG CCTTTGGCGT CGGGCCGTTC
CCGGCGGCCA TGTTGATGCA TCAAGTCGTG CCGCGACTGC GCCTGGATCA CCCGGCGGTT
ACCCTACGTG TGGAAGTGAA CAACTGGCAG ATTCTCGAAG CGCGGCTGCG CGCTGAAGGG
ATCGAATTCT TTGTTGCCGA TATCCGTAAC TTCACGGCCG AATCCGATCT TTTGATCCGC
TCGCTGGGCC AGGTTTCGGC AGGCTTCTTC GTGCGTCCGG AGCATCCGCT GGCCGGGCGT
AAAGTGGCGA TGGGCGAGCT GGAAGGCTAT GGCATCGCCA CGACGCGCTT GCCCGAAGTC
GTGAAACTCG AGACCGGCCG AACCCTCGGC ATCTCGACCC GCCAGGTGCT GCCCATTGTG
CTGGAGTGTG ATGATGTGGC GTTGCTCAAG ACCGTCGCAG GTTCAACCGA CACCATCCTC
GGCGTCATCC ATGGCGCCGT GGCTGAAGAC ATTCGGGTGG GGCGTTTGAT CGAGCTTCAT
GTTGTCGACA GACCGGGATT TCACTCTGAA ATCGGGGTGG TGAGTTTGCT GGGCAGGAGC
TTGTCGCCGA CGGCTTTGTG TGTGATCGAG GCGGTGGTTG CCGAGATGCA ATCCGTTCAC
GTCGAACAAT CCCCACGTCT TTAG
 
Protein sequence
MDLKRLSHLL ALADERHFGR AAERVHLSQP ALSRSIQALE SETGQRLFDR DTGDVRPTPA 
GVFLIERARR LLFDARSLER DMTLYSDRQL GSLAFGVGPF PAAMLMHQVV PRLRLDHPAV
TLRVEVNNWQ ILEARLRAEG IEFFVADIRN FTAESDLLIR SLGQVSAGFF VRPEHPLAGR
KVAMGELEGY GIATTRLPEV VKLETGRTLG ISTRQVLPIV LECDDVALLK TVAGSTDTIL
GVIHGAVAED IRVGRLIELH VVDRPGFHSE IGVVSLLGRS LSPTALCVIE AVVAEMQSVH
VEQSPRL