Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2281 |
Symbol | |
ID | 3715622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2632214 |
End bp | 2633137 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_348013 |
Protein GI | 77458508 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCTCA AACGACTGTC ACACCTTCTC GCCCTGGCCG ATGAACGCCA TTTCGGTCGC GCCGCCGAGC GCGTGCACCT CAGCCAGCCG GCCCTGAGCC GCAGCATTCA GGCGCTGGAA AGCGAAACCG GGCAGCGCCT GTTCGACCGC GACACCGGCG ACGTCCGCCC GACACCGGCG GGGGTCTTTC TGATCGAGCG GGCGCGACGG TTGCTGTTCG ATGCCCGTTC GCTGGAGCGC GACATGACGC TCTACAGCGA TCGCCAACTG GGCAGCCTCG CCTTTGGCGT CGGGCCGTTC CCGGCGGCCA TGTTGATGCA TCAAGTCGTG CCGCGACTGC GCCTGGATCA CCCGGCGGTT ACCCTACGTG TGGAAGTGAA CAACTGGCAG ATTCTCGAAG CGCGGCTGCG CGCTGAAGGG ATCGAATTCT TTGTTGCCGA TATCCGTAAC TTCACGGCCG AATCCGATCT TTTGATCCGC TCGCTGGGCC AGGTTTCGGC AGGCTTCTTC GTGCGTCCGG AGCATCCGCT GGCCGGGCGT AAAGTGGCGA TGGGCGAGCT GGAAGGCTAT GGCATCGCCA CGACGCGCTT GCCCGAAGTC GTGAAACTCG AGACCGGCCG AACCCTCGGC ATCTCGACCC GCCAGGTGCT GCCCATTGTG CTGGAGTGTG ATGATGTGGC GTTGCTCAAG ACCGTCGCAG GTTCAACCGA CACCATCCTC GGCGTCATCC ATGGCGCCGT GGCTGAAGAC ATTCGGGTGG GGCGTTTGAT CGAGCTTCAT GTTGTCGACA GACCGGGATT TCACTCTGAA ATCGGGGTGG TGAGTTTGCT GGGCAGGAGC TTGTCGCCGA CGGCTTTGTG TGTGATCGAG GCGGTGGTTG CCGAGATGCA ATCCGTTCAC GTCGAACAAT CCCCACGTCT TTAG
|
Protein sequence | MDLKRLSHLL ALADERHFGR AAERVHLSQP ALSRSIQALE SETGQRLFDR DTGDVRPTPA GVFLIERARR LLFDARSLER DMTLYSDRQL GSLAFGVGPF PAAMLMHQVV PRLRLDHPAV TLRVEVNNWQ ILEARLRAEG IEFFVADIRN FTAESDLLIR SLGQVSAGFF VRPEHPLAGR KVAMGELEGY GIATTRLPEV VKLETGRTLG ISTRQVLPIV LECDDVALLK TVAGSTDTIL GVIHGAVAED IRVGRLIELH VVDRPGFHSE IGVVSLLGRS LSPTALCVIE AVVAEMQSVH VEQSPRL
|
| |