Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2259 |
Symbol | |
ID | 3715639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2592361 |
End bp | 2593176 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_347991 |
Protein GI | 77458486 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0423097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAG AGGTGCGCAA GGTCATCGCC CAGCGTGAGT CCGCACCGCG CAGCGAACGT TATCCCGACT ATCAGGACGT GCCGCGCGTA ATGACCGTGC TGGTGCGCGA TCAGGCGACC GGCGAGTACA ACGAACCGCA CGTGCATCGG CACGGGCAAT TGCTGTATGC CTCGAACGGC GTGATGCGGG TGGCTACCGA GCGCGGATTG TGGATCCTGC CGCCGAAACG GGCCCTGTGG ATTCCACCCG GGGTGATCCA CGACCAGTTG ATGCTGAGCG CGGTCAAGAT GCGCTCGATC TACATCGAGC CGCAGGTCTG CGCAGGGCTG GGCGATCACT GCAAAGTACT GGAGATCCCC GGACTGCTGC GCGAGTTGAT TCTGGCCTTG GCCGAGCAGC CGATCGAATA CCCGCAGGAA GGCCGCAACG CACACATCGT GGCGCTGATA CTCAGTGAGT TGCAGGCGGC CCGGACGTTG CCGATCGAAG TGCCGTGGCC GGTCGACCGG CGACTGGTCA CGGTGTGCGA GGCGATTCTG CAGGACCCCG GACAAGACCA TTCAATCGGC TATTGGGCAG ACCGGGTCGG CGCCAGTTCG CGAACGCTGA TTCGCCTGTT CGTCAATGAA ACCGGCCTGA ATTTCCGCCA CTGGCTGCAA CAGGTGCGGC TGGCGACCGC CATCGACCGG CTCGACCAGG GGCAATCCGT CGGGGTGATT GCCCGGGATC TGGGTTACGC CAGCCAGAGT GCCTTCAGTG CCATGTTCAG ACGGGTGATG GGCGAATCGC CTCGTGAATT TCTCGTCCGC GACTAG
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Protein sequence | MKREVRKVIA QRESAPRSER YPDYQDVPRV MTVLVRDQAT GEYNEPHVHR HGQLLYASNG VMRVATERGL WILPPKRALW IPPGVIHDQL MLSAVKMRSI YIEPQVCAGL GDHCKVLEIP GLLRELILAL AEQPIEYPQE GRNAHIVALI LSELQAARTL PIEVPWPVDR RLVTVCEAIL QDPGQDHSIG YWADRVGASS RTLIRLFVNE TGLNFRHWLQ QVRLATAIDR LDQGQSVGVI ARDLGYASQS AFSAMFRRVM GESPREFLVR D
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