Gene Pfl01_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2253 
Symbol 
ID3715633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2585720 
End bp2586949 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content64% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_347985 
Protein GI77458480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGGGG AAACAGCGCT CGAACGCCTG AGCGGCACGC CATCGACCAC TTCGCCGTGG 
TGGGTGATCG GGCTGTGCAT GCTGTTCAAC GTGATCGACG GGCTTGATGT GATGGCCATG
GCCTTCACCG CCAGCCGGGT TGCGGCGGAG TGGGCGTTGA GCGGCGCGCA ACTGGGCCTG
TTGCTGAGCG CAAGTCTGGT CGGGATGGCG CTTGGTTCGC TGCTGGCCGC GCCCAGGGCC
GACCGCTTCG GGCGCAGGCC TTTGCTGCTT GGCGGTCTGC TGCTCAGCGG CCTGAGCATG
TTGCTGTCGT TCTGGAGCCC GGATCACCAC GTATTGATGC TTCTGCGATT GCTGACCGGC
ATCGGCACCG GGGCGGTGCT GGTGGGGGCG AATGTGCTGA CGTTCGAACA CGCCAGCCCG
CTACGGCGCA ATCTGGCCAT CGCATTGCAA TCCCTCGCCT TTGCCATGGG CGCCAGTCTG
GGCGGTGTGC TGGCGCATGT ACTGAATGAA TCCGTTGGCT GGCGGTATGT CTTTCTTGCC
GGAGGTTGCA TCACGCTGGC GGCCGCGCTT GCCGGCGTCT TTTGGCTGCG AGAGTCGCCG
TCATTTCTGG CACTCGAACG CCGCACGCCA ATCGCTACAG CGTCGCCTGA CAACCCCAGC
CGACCGCTTT TGCCCGGTCA GTGGCAACAG ACCACATCGC TGGCACTGGC ACTCTTTCTG
TTGATGTTCT GCTTTTACTT CGTCATGAGC TGGACCCCGA GCCTGCTGGT CCACAACGGC
TTTACTGATC GGCAAGGCGC ACGTATCGGG GTGCTGTTGG CTTCTGGAGG TATGCTCGGC
GCGCTGCTGC TGGGGCTGGC AGCCAATCGT TTCGGCTGCC GGCGATTGTT GTCGGGTTTT
CTGCTGCTCA ACGCCGCCCT GCTGCCCCTG ATGGTGCCGG CCTCTCACGT ACCCGGTGTG
GCTGCGCTCG TGGCGGTTAC GCTCGGCCTG ATGCTCAACG GTGCAGTCGC CGCCCTGTAT
GTCCTGGCTC CTCAAGCGTT CTGCACCTCG GTTCGTACGA CCGGTGTCGG CGTGGTGCTG
GGGATGGGGC GTCTGGGGGC GATCATTTCG CCGCTGGTCG CCGGTTTTCT GCTGGATGCC
GGATGGACCG CACAACACCT GTTCACGTTT TTCGCCGGTA GCCAGGTGTT GGCGGCCCTG
CTGATCTGGC GTGGCACTAA GGGACGATGA
 
Protein sequence
MRGETALERL SGTPSTTSPW WVIGLCMLFN VIDGLDVMAM AFTASRVAAE WALSGAQLGL 
LLSASLVGMA LGSLLAAPRA DRFGRRPLLL GGLLLSGLSM LLSFWSPDHH VLMLLRLLTG
IGTGAVLVGA NVLTFEHASP LRRNLAIALQ SLAFAMGASL GGVLAHVLNE SVGWRYVFLA
GGCITLAAAL AGVFWLRESP SFLALERRTP IATASPDNPS RPLLPGQWQQ TTSLALALFL
LMFCFYFVMS WTPSLLVHNG FTDRQGARIG VLLASGGMLG ALLLGLAANR FGCRRLLSGF
LLLNAALLPL MVPASHVPGV AALVAVTLGL MLNGAVAALY VLAPQAFCTS VRTTGVGVVL
GMGRLGAIIS PLVAGFLLDA GWTAQHLFTF FAGSQVLAAL LIWRGTKGR