| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2248 |
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| Symbol | |
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| ID | 3715628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 2578538 |
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| End bp | 2581417 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | transcriptional regulator |
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| Protein accession | YP_347980 |
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| Protein GI | 77458475 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTCTT TTCCGGACGC ATTGCGCGAA TCCCTCACGA CCGAATTCAT TTTTGGACCG
TTCTGTGTCG TTCCAGGCAA ACGTCTGCTG ACCCGCAACG GGGTGGCGGT CGAGATCGGC
GGACGGGCGC TGGATCTGCT GATCGCCTTG CTTGAGCAGC CGGGGCGGGT GCTGTCCAAG
TACGACCTGA TCGACAAGGT GTGGCCCGAC AGTGTGGTGG CCGAAGGCAG TCTGCGTTTC
CATATGACCG GCCTGCGGCG GATTCTCGGC GATGGCGAGG AGCAGGCACG TTACATCGCG
ACCCAGGTGG GCGTGGGGTA TGCCTTCGTC GCGCCGCTGG AAAGAAAACA GACCGCTGTG
CACCCGGCGC CCATCGCGAC CCGAGCCACA GAGGGCGTCT GCAGTCTGCC GCCACGGGCC
AGACTGATCG GCCGCGAGAT CGATCTGCAA CTGGTCATCG ACCATATGCA GCAACCGAGG
TTGTTCACCA TCGTCGGCCC CGGCGGCGTC GGCAAGACCA GCCTGGCCAT CGAAGTGGCG
CACCGCATCG CCGCCCAAGG CTATGAGCGC GTCAGCTTCG TCGATCTGGC ACAAGTGGAA
GACAGCGCGC TGGTGCCATC GGCACTGGCC CGATCGCTGG ACATCCCGGT GCAGGCCGAA
GACCCGATGT TCGTCCTGCT CGCGCATTTG CGCGAGCAGC GGTTGATGCT GGTGATCGAC
AATTGCGAAC ACCTGATCGA CGCGGTGTCG ATCCTTCTGG AACAGATCAG CGACACCGCG
CCGGAGGTCG GGGTTCTGGC CACCAGTCGC GAGCCGCTGC GGGTGCGTGG CGAATACGTG
CACTGGCTCA ATCCACTGGA ATTTCCCCGT GAGCCGCAAC ACCTCGGCGT TGAGGAGTTG
CTGGCATTCC CGGCCATCAA GCTGTTTGTC GAACGCGCGT CGTTGAGCAA TGCCACGCTG
CTGGAAGCGG GCGGCGGGCA AATGATTGCG GACATTTGCC AGCGGCTGGA GGGCATGGCG
CTGCCGATCG AGCTGGCGGC GATGCGGGTC GCCAGCCACG GATTGAAGGC CACCCACGCG
CTGCTCGGCG AGCGTTTTTC GCTGGGCTGG TCGGGACGCA GGACGGCGGT GCCGCGCCAT
CAGACCCTGC GTGCCATGCT CGACTGGAGT TATGACCTGC TGTCGCCGCA AGAGCGCCTG
GCGCTGGAGC GGTTTTCGGT CTTCGTCGGG CCGTTTTCCC AGGAAGCCGC CGCGCAGGTA
GTTGCCGAAT CGCAACACGA AAGCGCCACA ACGGCCGCGA TCCTCGATGA TCTGGTGTGC
AAGGGACTGG TCACGGTCGA TCACAGCGAC TCGACGGATT CGTATCGCTT GCTGGAGATG
ACGCGCGCCT ACGCCCGGGA GAAATTGACA GCGCGGGGAG AGGCCGAGGT CAATGCGCTG
GCGTTCCGCC ACGCGGCGTT TTACATGGAT TTGCTTGGGC ATCTGGGAAC TTCCCCCGAC
GAAATTTTCC GTCACTCGGC GCGTCTGGCC AGCCAGTTGG GCAATGTTCG CGGTGCGCTG
GAATGGAGCT TCGGGCCCCA CGGCGATCCC GGCCTGGCGT TGCCGCTGGC GGCTGCGAGC
GCGCCGTTGT TCCTGCATTT TTCCTTGCTG GTCGAGTGCC GCACCTGGTG TTCCCGGGCG
GTGGAACTGC TGGAGCTGGG TTACTACGGC ACGCCGACCG AAATGGAATT GCAAGCCGCA
CTCGGCCTGG TCCTGATGTT CACCCGAGGC AACAGCGAAG CCGCGGAAAA GGCCTTGCTC
CGGGCGCAGG ACATCGCCGT CGCGTTGAAC GACTACGGCT CCCAGCTGAG GTTGTTGGGG
CGCCTGCAGA TCTTTTACGA GCGCATCGGT GATTTCCCTT CGTCGCTGGC CTGGGCGGAG
CAGGCGGCCG TGGTCGGCAA TATCCTCAAC GAGCCTGCCG CCATCGCGAT TGCCTCATCG
CTGACCGGCA TCTCCCATCA TCTGCTCGGC AACCAGCGTC TGGCCCGTCA GGAACTGGAA
AGCTCGTTGC GCAACAGCTT GCCGTCCCAT CCCAGCAACA CGATTTACTA CGGCTTCGAT
CACCGCAATC GCACGGGGCT GGCGCTGGCG CGCTCGCTGT GGCTGCTGGG CTATCCCGAC
CAGGCGCGGC GCTGGGCCGA GCAGATTGAG GCCGAAGCGT CGGCGTTGCA GCATCCGGTC
ACCTACTGCA TCGCCATGGT CTGGATCTTG TGCATCTATA TCTGGACCGG TGATCTGGCG
AAGGCCACCG CGAGCCTTGA GCGGTTCAGC GCCATCGCCG AAACCAACGC ACTCGGCCCC
TACATTGCCG CCTGCCACGG GTTGCGTGCG GCGATCGCCA TCCGCGCCGA GGAGCCGGGG
GATGCAGTTG CCATGCTGGA AGAAAGTCTG GCGCGGTTGC GCAGCATGCG TTACGAACTG
CTCACGACCT CATTTGAAAT CGCACTGGCC GAAGGCCTGA TCCTGGTGGG CCAACACCCA
AAGGCACTGA CCCTGGTCGA CAGCACCATC GATCACTGCC GCCGAAGCGG TGATGCCTTT
GCGCTGCCGG AGTTACTGCG GATCAAGGCC GGTATTCTCA AGGTCATCCA GGCCGAAGCT
GAACAAGTCA TGCTGGCCGT TCTTGAGGAT TCCATCACGT TGAGCCGCGA GCAGGGCGCC
TGGGCGTGGG AGTTGCGGTC AACGATGGAT CTTGCCCGTT TCTGGCTTGA ACAGGGTCAG
CCGGATCATG CCCGGACGTT GCTCGGCGCC TGTCGCGAGC GGGCTTCGGA AGGCTTCGAC
AGCCTTGATC TGCGTCGGCT GGAAAGTTTC TGGCAGAGCC TGCACGCTAC TCCGGCGTAA
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| Protein sequence | MESFPDALRE SLTTEFIFGP FCVVPGKRLL TRNGVAVEIG GRALDLLIAL LEQPGRVLSK
YDLIDKVWPD SVVAEGSLRF HMTGLRRILG DGEEQARYIA TQVGVGYAFV APLERKQTAV
HPAPIATRAT EGVCSLPPRA RLIGREIDLQ LVIDHMQQPR LFTIVGPGGV GKTSLAIEVA
HRIAAQGYER VSFVDLAQVE DSALVPSALA RSLDIPVQAE DPMFVLLAHL REQRLMLVID
NCEHLIDAVS ILLEQISDTA PEVGVLATSR EPLRVRGEYV HWLNPLEFPR EPQHLGVEEL
LAFPAIKLFV ERASLSNATL LEAGGGQMIA DICQRLEGMA LPIELAAMRV ASHGLKATHA
LLGERFSLGW SGRRTAVPRH QTLRAMLDWS YDLLSPQERL ALERFSVFVG PFSQEAAAQV
VAESQHESAT TAAILDDLVC KGLVTVDHSD STDSYRLLEM TRAYAREKLT ARGEAEVNAL
AFRHAAFYMD LLGHLGTSPD EIFRHSARLA SQLGNVRGAL EWSFGPHGDP GLALPLAAAS
APLFLHFSLL VECRTWCSRA VELLELGYYG TPTEMELQAA LGLVLMFTRG NSEAAEKALL
RAQDIAVALN DYGSQLRLLG RLQIFYERIG DFPSSLAWAE QAAVVGNILN EPAAIAIASS
LTGISHHLLG NQRLARQELE SSLRNSLPSH PSNTIYYGFD HRNRTGLALA RSLWLLGYPD
QARRWAEQIE AEASALQHPV TYCIAMVWIL CIYIWTGDLA KATASLERFS AIAETNALGP
YIAACHGLRA AIAIRAEEPG DAVAMLEESL ARLRSMRYEL LTTSFEIALA EGLILVGQHP
KALTLVDSTI DHCRRSGDAF ALPELLRIKA GILKVIQAEA EQVMLAVLED SITLSREQGA
WAWELRSTMD LARFWLEQGQ PDHARTLLGA CRERASEGFD SLDLRRLESF WQSLHATPA
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