Gene Pfl01_2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2234 
Symbol 
ID3715653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2563983 
End bp2564747 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_347966 
Protein GI77458461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA CTCAATCCTT GAAAGTGGCC CTGGTGACCG GCGCCGGCAG CGGGATCGGC 
CGTTCCGTAG CCCTGGGCCT GCTGGCCGAC GGTTACACCC TGGTGCTGGC CGGGCGCCGG
CCCGACCCCT TGCAGGCCTT GGTCGATCTG GCGGCCGGCG AAGGACGCGA AGCCTTGGCG
GTGCCCACCG ATGTACGCGA CCCCGCCAGT GTCGACCAGC TGTTTGCAAC CATTGCCGAG
GTCTACGGAC GCCTGGACGT GGTCTTCAAC AACGCCGGGG TCAATGCCCC TGCCGTGCCG
CTGGACGAAC TGACCTTCGA GCAGTGGCGA AACGTGATCG ACACCAACCT CAATGGCGTT
TTCCTCTGTG CCCGTGGCGC GTTCGGGCTC ATGCGCCGGC AACAGCCACA GGGTGGCCGC
ATCATCAACA ACGGTTCGAT TTCGGCTCAC ACCCCGCGTC CTTTCAGCAG CGCGTACACC
GCCAGCAAAC ACGCGGTACT GGGATTGACC AAATCGCTGG CGCTGGATGG TCGGGACTTC
AATATCGCCT GCAGCCAGAT CGATATCGGC AATGCCTTGA CCGAAATGTC GGTACGCATG
ACCAAAGGCG TGCGCCAGGC CAACGGCAGC ATCGCCGTGG AGCCGATGGT CGACGTCAAG
CATGTCGCCG ACGCCGTGCG CTACATCGCC GGTCTGCCCC TGTCGGCCAA CGTCCTGAAC
ATGACCGTCA TGGCCACTGC CATGCCGTTT GCCGGCCGTG GTTGA
 
Protein sequence
MSDTQSLKVA LVTGAGSGIG RSVALGLLAD GYTLVLAGRR PDPLQALVDL AAGEGREALA 
VPTDVRDPAS VDQLFATIAE VYGRLDVVFN NAGVNAPAVP LDELTFEQWR NVIDTNLNGV
FLCARGAFGL MRRQQPQGGR IINNGSISAH TPRPFSSAYT ASKHAVLGLT KSLALDGRDF
NIACSQIDIG NALTEMSVRM TKGVRQANGS IAVEPMVDVK HVADAVRYIA GLPLSANVLN
MTVMATAMPF AGRG