Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2231 |
Symbol | |
ID | 3715650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2560081 |
End bp | 2560665 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_347963 |
Protein GI | 77458458 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.558633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGA CCTACGACGA CACCCGCCAA CATTTGCTCG ACACCGGCCA CCGGATGATG GCCGAGAAAG GCTTCACCAG TGTCGGCCTG AACGAGATCC TGCAGACCGC CGGCGTGCCC AAGGGCTCGT TCTATCACTA CTTCAAATCC AAGGAACTGT ACGGCCAGGC CCTGCTCGAG GATTACTTCG TCGACTATCT GGCCGACATG GAGCGACGCC TGACGCTGCC CGGCCTGAGC GCCCATGAGC GGCTGATGGA TTACTGGCAG GGCTGGCAGG ATCGCTGCAC TCTGGAAGGC CATGGCGACG AATGCCTTGT GGTGAAACTC AGTGCTGAGG TGGCTGACCT TTCCGAAACC ATGCGCCTGA CCTTGCGTGA TGGTGCAGAG CGAGTGGTGG CGCGCATCAG CGAGTGCATC GAGCAGGGCC AGGTCGAAAA AAGCTTGCCT GAGGGCGATG CTCGGCAACT GGCTGAAACC CTGTATCAAC TGTGGCTGGG GGCCAGTCTG CTGAACAAAC TGCAACGCAC AGGGCAATCG TTGAGTACGT CGATGGCGAC CACGAAGCGC CTGTTGAGCG TGTGA
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Protein sequence | MKPTYDDTRQ HLLDTGHRMM AEKGFTSVGL NEILQTAGVP KGSFYHYFKS KELYGQALLE DYFVDYLADM ERRLTLPGLS AHERLMDYWQ GWQDRCTLEG HGDECLVVKL SAEVADLSET MRLTLRDGAE RVVARISECI EQGQVEKSLP EGDARQLAET LYQLWLGASL LNKLQRTGQS LSTSMATTKR LLSV
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