Gene Pfl01_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2227 
Symbol 
ID3715700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2555407 
End bp2556951 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347959 
Protein GI77458454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.642129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG CCTGGAACGA GGGATATTTC ACGGACGAAG GTTACACCTA CGGGTACAGC 
CGGGAAATCA ATCCGGTTTT CCAGCGTTAT TGTCTGCTGT TGCGCGGTTT CGCCACGCTG
GAGAGTACCG ACGGTTACCA CTGTGAACTG GGTTTCGGTC AGGGCGTCTC GATCAATATC
CATGCCGCGG GCAATCCGGG CACCTATGTC GGTACCGACT TTCACCCGGG TCAGGCGTCC
CATGCCATCG CTCTCGCACG CGACTGGGGC AGCGATGCGC GACTGTATGA CGACAGCTTC
GAGCAGTTGC TGGCCCGTCA TGACTTGCCC CAGTTCGACA GCATCAGCCT GCATGGCATC
TGGACCTGGG TCAGCCGCGA TAACCACAAG CTGATCGTGG AATTCGTCCG TCGCCATCTC
AAACCAGGTG GTCTGCTCTA CGTCAGCTAC AACTGCTTCC CGGGCTGGTC GCCTCAGGCA
CCCTTGCGCC AACTGTTCAG CCTGCACGAC CGGTTCGCCA GCCAGGCCGG TGCGCGCCCG
GATCAGCGTA TCGATGCAGC GCTGCAGTTT TCCGAAGCGC TATTGGCGGC CAACCCCAAA
TATGCCAACT CCGCACCGGG TCTGGACGCC AAGCTCCAGA GCATCAAGGG CCAGGACCGC
CAGTACGTCG CCCATGAGTA TTTCAACCGC GACTGGAACT GCATGTATTT CACCGACGTG
GTTGATGCCC TGGCACCCGC CAAGCTCGAT TACGCCACGA CAGCCGTGCC GCTGGACTCC
GTCGACCCGC TCAACCTGAG CGCCGAAGGC ATGGACTTTC TGGAAGGTAT CGAGCATCCC
GTCATGCGCG AGCAGGCGCG TGACTACTTC GTGAACCAGA GTTTTCGTCG GGACCTCTAT
GTACGCGGCG CCAACAGACT GTCTGCCACC GAGCACCGCG AGCGCATGCT CGGCACGCGC
TTCGTCCTGT TACAGGCGGC CGAGAGCGTG CCAGCCAACG TCACTGGTCC GGCAGGCGCA
GCGACATTGC AGACAGAGAT CTATGGCCCG GTACTCGCAG CCCTGGCGGA TGACGCCTAT
GTGCCGAAGA CCTTGCGGCA TTTGCTGGAT CTTGTGCCCT CGTTGGCCTA TGGCGACGTC
GAGCAGGCCC TCAACGTGCT GATCGGCATG AGCGTCGTGG CGCCCTGTCA GAGCGAGGCG
GCCGAAAAGC TGGTGCAGGC CCGCTGCAAT ACCCTAAACC TGCAGCTGTG CAAGCGTTCG
TTGTATGGCA ACAAGATTCA GACCCTGGCG AGTCCGGTGA CCGGTGGTGG CGTGACGGTC
AGCCGCTTCC AGCAGTTGTT CCTGATATCG ATCAAGCAAG GCAAAAAACA CCCGGATGAA
TGGGCGCAAC TGGCGTGGGG CATCATCGGC GGCCAGGGCG AAGGTCTCCT CAAGGACGGC
AGGGCCCTGA CCACCGCGGA AGAAAACCTT GCCGAACTGA CCGTGCAGGC CCAAGCGTTT
GCCGAGAGTA CGCTGGTGAT TCTCAAGGCT TTGAAAATCG TCTAG
 
Protein sequence
MSNAWNEGYF TDEGYTYGYS REINPVFQRY CLLLRGFATL ESTDGYHCEL GFGQGVSINI 
HAAGNPGTYV GTDFHPGQAS HAIALARDWG SDARLYDDSF EQLLARHDLP QFDSISLHGI
WTWVSRDNHK LIVEFVRRHL KPGGLLYVSY NCFPGWSPQA PLRQLFSLHD RFASQAGARP
DQRIDAALQF SEALLAANPK YANSAPGLDA KLQSIKGQDR QYVAHEYFNR DWNCMYFTDV
VDALAPAKLD YATTAVPLDS VDPLNLSAEG MDFLEGIEHP VMREQARDYF VNQSFRRDLY
VRGANRLSAT EHRERMLGTR FVLLQAAESV PANVTGPAGA ATLQTEIYGP VLAALADDAY
VPKTLRHLLD LVPSLAYGDV EQALNVLIGM SVVAPCQSEA AEKLVQARCN TLNLQLCKRS
LYGNKIQTLA SPVTGGGVTV SRFQQLFLIS IKQGKKHPDE WAQLAWGIIG GQGEGLLKDG
RALTTAEENL AELTVQAQAF AESTLVILKA LKIV