Gene Pfl01_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2160 
Symbol 
ID3715740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2442242 
End bp2442862 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_347892 
Protein GI77458387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.17805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.65049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCG CCACCCTCTC CCTGTTTCTG CCCGCCTGTT TCGCCCTGAA CATGGCACCG 
GGGCCGAACA ATCTGCTGTC GGTCAGCAAC GCCACCCGCT ACGGCTATCG TCGCGCCTGC
GTGGCCGGTG TCGGTCGGTT GCTGGCGTTC GCCGGGATGA TCGCCCTCGC GGCGGCGGGG
CTGGCGGTGG TACTGCAAAC CTCTGAACTG TTGTTCTATG GGATCAAGAT CATCGGCGCG
GGGTATCTGC TGTACCTGGC GTGGCAGCTG TGGCGGGCCA ATCCTGCCGC CGAAGACGCC
GTTGCGGCGT CGGCGAACGG ACTTATGGCT CTGGCTCGCC AGGAATTCCT GGTGGCAGCG
GGAAATCCCA AGGCAATCCT TATCTTCACC GCCTTCCTGC CGCAATTCGT CGACCCGGCC
CGCGCCATCA CCCCGCAATT CATGTTGCTG GGCGCGCTGT TTCTGTTGCT GGAATGGATC
GCCATCAGCG CCTACGCGTA CATGGGGCTG CACATGCGCC GCTGGTTCGC CGAGCCGCGC
GGCAAGCGGA TTTTCAACCG TTGCTGCGCC GGGCTGCTGT CGGCGGCGGC TTCGGTGTTG
CTGATGGCCA AGCGGGCCTA G
 
Protein sequence
MDIATLSLFL PACFALNMAP GPNNLLSVSN ATRYGYRRAC VAGVGRLLAF AGMIALAAAG 
LAVVLQTSEL LFYGIKIIGA GYLLYLAWQL WRANPAAEDA VAASANGLMA LARQEFLVAA
GNPKAILIFT AFLPQFVDPA RAITPQFMLL GALFLLLEWI AISAYAYMGL HMRRWFAEPR
GKRIFNRCCA GLLSAAASVL LMAKRA