Gene Pfl01_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2078 
Symbol 
ID3716049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2363299 
End bp2364141 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content64% 
IMG OID 
Productsilent information regulator protein Sir2 
Protein accessionYP_347810 
Protein GI77458305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.538647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC GTCCCCTCCC CGACCCGCTC GACTATCTGC AACAGGTCAT GGCCGACGGC 
GACTTCATTG TGCTGACCGG CGCCGGCATC AGCACGCCGT CGGGCATCCC GGACTACCGC
GACACCGACG GTGTGCGCCG GGGCCGGCAG CCGATGATGT ACCAGGAATT CCTCGCTGCC
CCGCAATCGC GCCGGCGCTA CTGGGCCCGG GCCATGCTCG GCTGGCCACG GGTGCGCCAG
GCACGGCCGA ACGCTGCCCA TGAGGCGCTG GCCAGTCTGC AAAGCCACGG GCGGATCGGC
GGTTTGATTA CTCAGAATGT CGACACCTTG CACGATCAGG CCGGCAGTCA CGACGTCATC
GAACTGCACG GCAGCCTGCA CCGGGTGTTG TGCCTGGATT GCGGCCAGCG CAGCGAGCGG
GATTCGATTC AGCAATTGAT GGAAACGCAG AACCCGTATC TGGCAGGCGT CGATGCCGTG
CAGGCACCGG ACGGCGACAC CCTGCTCGAC CCGGCTTTCG AGGCGCGCTT TCAGGTGCCG
CATTGCCCGC ATTGCGCAGG GGAACGAATG AAACCGGACG TGGTGTTTTT TGGTGAGAAC
GTGGCGCAGC CAACGGCGGC GCGGGCCATG GCGCTGGCGG AAAATGCCGC CGGGATGCTG
GTGGTGGGTT CGTCGCTGAT GGCGTATTCG GCGTTTCGCC TGTGCCGGGT GATTGCGGAC
CGGGGCAAGC CGCTGATTGC GATCAATCTG GGGAAGACGC GGGCGGATGA GTTGCTGGAT
TTGAAGATTG AGGGGTGTTG TGAGGAATTG TTACCGCTGT TGGCTCAAGC AATGAATGGT
TGA
 
Protein sequence
MLDRPLPDPL DYLQQVMADG DFIVLTGAGI STPSGIPDYR DTDGVRRGRQ PMMYQEFLAA 
PQSRRRYWAR AMLGWPRVRQ ARPNAAHEAL ASLQSHGRIG GLITQNVDTL HDQAGSHDVI
ELHGSLHRVL CLDCGQRSER DSIQQLMETQ NPYLAGVDAV QAPDGDTLLD PAFEARFQVP
HCPHCAGERM KPDVVFFGEN VAQPTAARAM ALAENAAGML VVGSSLMAYS AFRLCRVIAD
RGKPLIAINL GKTRADELLD LKIEGCCEEL LPLLAQAMNG