Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2078 |
Symbol | |
ID | 3716049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2363299 |
End bp | 2364141 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | silent information regulator protein Sir2 |
Protein accession | YP_347810 |
Protein GI | 77458305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.538647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACC GTCCCCTCCC CGACCCGCTC GACTATCTGC AACAGGTCAT GGCCGACGGC GACTTCATTG TGCTGACCGG CGCCGGCATC AGCACGCCGT CGGGCATCCC GGACTACCGC GACACCGACG GTGTGCGCCG GGGCCGGCAG CCGATGATGT ACCAGGAATT CCTCGCTGCC CCGCAATCGC GCCGGCGCTA CTGGGCCCGG GCCATGCTCG GCTGGCCACG GGTGCGCCAG GCACGGCCGA ACGCTGCCCA TGAGGCGCTG GCCAGTCTGC AAAGCCACGG GCGGATCGGC GGTTTGATTA CTCAGAATGT CGACACCTTG CACGATCAGG CCGGCAGTCA CGACGTCATC GAACTGCACG GCAGCCTGCA CCGGGTGTTG TGCCTGGATT GCGGCCAGCG CAGCGAGCGG GATTCGATTC AGCAATTGAT GGAAACGCAG AACCCGTATC TGGCAGGCGT CGATGCCGTG CAGGCACCGG ACGGCGACAC CCTGCTCGAC CCGGCTTTCG AGGCGCGCTT TCAGGTGCCG CATTGCCCGC ATTGCGCAGG GGAACGAATG AAACCGGACG TGGTGTTTTT TGGTGAGAAC GTGGCGCAGC CAACGGCGGC GCGGGCCATG GCGCTGGCGG AAAATGCCGC CGGGATGCTG GTGGTGGGTT CGTCGCTGAT GGCGTATTCG GCGTTTCGCC TGTGCCGGGT GATTGCGGAC CGGGGCAAGC CGCTGATTGC GATCAATCTG GGGAAGACGC GGGCGGATGA GTTGCTGGAT TTGAAGATTG AGGGGTGTTG TGAGGAATTG TTACCGCTGT TGGCTCAAGC AATGAATGGT TGA
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Protein sequence | MLDRPLPDPL DYLQQVMADG DFIVLTGAGI STPSGIPDYR DTDGVRRGRQ PMMYQEFLAA PQSRRRYWAR AMLGWPRVRQ ARPNAAHEAL ASLQSHGRIG GLITQNVDTL HDQAGSHDVI ELHGSLHRVL CLDCGQRSER DSIQQLMETQ NPYLAGVDAV QAPDGDTLLD PAFEARFQVP HCPHCAGERM KPDVVFFGEN VAQPTAARAM ALAENAAGML VVGSSLMAYS AFRLCRVIAD RGKPLIAINL GKTRADELLD LKIEGCCEEL LPLLAQAMNG
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