Gene Pfl01_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2024 
Symbol 
ID3716073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2307302 
End bp2308654 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content61% 
IMG OID 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_347756 
Protein GI77458251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGA GCGTATTTGG TACGGGCTAT GTTGGCCTGA TACAAGCAGC CGCACTTGCC 
GATGTCGGAC ATCGCGTATT GTGCGTCGAT ATTGACCCGA ACAAGATTAA ACAACTGCAA
CAGGCAGTAC CGCCTATTAG CGAACCGGGT CTTTCGGCAA CTTTGGAAGA AAACATCAAG
GCCGGGCGTT TGTTGTTCAG CACCCAGGCC AGCGATGCGG TGGAACATGC CGGACTGATC
TTCATCGCCG TGGGCACGCC GGCCGACGAA GACGGCTCCG CCGACCTCAG CCATGTGCTC
AACGTGGCGC GGCAGATCGC AAGCTGCATG GAGGACGATC GGACGCTGAT CATCAAATCC
ACGGTGCCGG TCGGCACGGC GGATCAGGTG CTGCACACCG CTGAAGAAGA ACTGCAGCGT
CGCGGCAAAA ACGGTCTGGC GGTGCGGGTG GTGTCCAACC CCGAGTTTCT CAAGGAAGGC
AGCGCCCTCG CCGACTGCAT GCGTCCGGAC AGGATCATTG TCGGCACTCT GGACCCTGAA
GCCCGGGAGC AGATGAGCGA GCTGTACGCA CCGTTCTGCC GCAACCACGA AAAACTGATG
TTCATGGACA ACCGCAGCGC CGAGCTGACC AAGTACGCGG CCAACGCGAT GCTCGCCACC
CGCATCAGCT TCATGAACGA GCTGGCCAAC CTCACCGAAC TGCTCGGCGC CGACATCGAA
GCGGTGCGCA AAGGCATCGG CTCCGATCCG CGCATCGGCT ATCACTTCAT CTACCCGGGC
TGCGGCTTCG GTGGCTCGTG CTTTCCCAAG GACCTGCGCG CCCTGCTGCA CACCGCTGAA
CACAACGGCA TGCCGCTGAA ACTGCTGCGC AGCGTCACCG ACGTCAACGA CGCGCAACGG
CACATCCTGT TCAGCAAACT CAGGGCGCAA TTTCCTCAAG GCCTGGCCGG CAAGTCCATC
GCGATCTGGG GCCTGGCGTT CAAGCCGAAT ACCGATGACA TGCGTGAAGC CCCGAGTCGT
TACCTGATGG AAGCGCTGTG GGCCGAAGGC GCCAGCGTGC AGGCCTACGA TCCGGAAGCG
ATGTCCGAGT GCCGGCGCAT TTACGGTTAC CGCAACGACC TGCACCTGTG TGCCACCCGC
GACGACACCC TGGAAGATGC CGATGCACTA GTGATCTGCA CCGAGTGGAA AAACTTTCGT
GTGGTGGACT TTGAACTGCT CGCCGAGAAG CTGCGCGCGA AGGTCATCGT CGACGGGCGC
AACCTTTACA ACCCGGAACA AGTGGCGGCC GCCGGCCTGC ATTACAGCGG TATCGGTCTG
CGCCACATCG CGCCCGACGA GGGGCGACCA TGA
 
Protein sequence
MDVSVFGTGY VGLIQAAALA DVGHRVLCVD IDPNKIKQLQ QAVPPISEPG LSATLEENIK 
AGRLLFSTQA SDAVEHAGLI FIAVGTPADE DGSADLSHVL NVARQIASCM EDDRTLIIKS
TVPVGTADQV LHTAEEELQR RGKNGLAVRV VSNPEFLKEG SALADCMRPD RIIVGTLDPE
AREQMSELYA PFCRNHEKLM FMDNRSAELT KYAANAMLAT RISFMNELAN LTELLGADIE
AVRKGIGSDP RIGYHFIYPG CGFGGSCFPK DLRALLHTAE HNGMPLKLLR SVTDVNDAQR
HILFSKLRAQ FPQGLAGKSI AIWGLAFKPN TDDMREAPSR YLMEALWAEG ASVQAYDPEA
MSECRRIYGY RNDLHLCATR DDTLEDADAL VICTEWKNFR VVDFELLAEK LRAKVIVDGR
NLYNPEQVAA AGLHYSGIGL RHIAPDEGRP