Gene Pfl01_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2015 
Symbol 
ID3716114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2297622 
End bp2298623 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID 
Productpolysaccharide deacetylase 
Protein accessionYP_347747 
Protein GI77458242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA AACAACTGAT TAAACGCACC AGCGGCTGGC TCTATCTAAA CTCGTCCGTG 
GGACGCAACC AGTTGCAAGG CGCAGGTGTG ATCCTGATGT TGCACCGCGT GTTGTCCAAT
GATCGCGCCG CCGACCTGCC GCACCGCAAC GAACTGTGCG TCGGGCCCAA GGCCTTCGAA
CACTTGCTGG TGTGGCTGCG CAAGCATTTC GATTGCGTGC CGCTGATGGA GATCCTGCAA
CCCAATGCCT TGCGCACCGA GCGTCCGCAG GTGGCGCTGA CCTTCGACGA CGGCTGGCGC
GACAACGCCG CCAACGCTTT TCCGCTGCTG CAGAAACATC AGGTGCCGGC GAGCATTTTT
CTTTCCACCG ATTTCATCGG CAGCCGGCAG CGTTTCTGGT GGGAAAGCAT CGGCGAAACC
CTGTGGGGCA GTCATGGTGA AAAAGCCCGC ACGCACCTGA TCGAATGCCT GCGTGCCGCC
GGCCAGCCGT TGCCAGTGCT GCTGGACGAC ATCGATGTGG ATCGCCGCAG TCTGACCCTG
TTGCATTATC TGCAAAGCCT CAAGGCGCTC GATCCGAAGA TACTCGAACG CCTGACCGAC
GAGTGCCCGC AAGAGTCGCA ACCCCAGGCA CTCGACTGGC ATCAGGTGCG GGCGATGGAG
TCTTCCGGTC TGGTGCGTTT CGGCCCCCAC GGCGCCAGTC ACGCGATCCT CACCGGCCTG
GACGACGTGC GCCTGAGCGA AGAAATCAGC CGCAGCAGCG ATGCCCTGAA CAACGGCTGC
AACCGGCCGT TGCCGGTGTA TTGCTATCCC AACGGGGACA ACGATGAGCG TGTGCGCGAA
CAGGTTGCCA ATCACGATTA CCCGTTCGCC CTCGGCACCG GCACCGGCCT CTATCGCGGC
ACAGGCGATC CGCTGAACCT GCCGCGCTTC GGTGTCAGCC AGCGCACAGC GCGCAATCCG
CAACTGCTGT CGTGGCGGAT CTACCGTGGA GCGCGGCCAT GA
 
Protein sequence
MAIKQLIKRT SGWLYLNSSV GRNQLQGAGV ILMLHRVLSN DRAADLPHRN ELCVGPKAFE 
HLLVWLRKHF DCVPLMEILQ PNALRTERPQ VALTFDDGWR DNAANAFPLL QKHQVPASIF
LSTDFIGSRQ RFWWESIGET LWGSHGEKAR THLIECLRAA GQPLPVLLDD IDVDRRSLTL
LHYLQSLKAL DPKILERLTD ECPQESQPQA LDWHQVRAME SSGLVRFGPH GASHAILTGL
DDVRLSEEIS RSSDALNNGC NRPLPVYCYP NGDNDERVRE QVANHDYPFA LGTGTGLYRG
TGDPLNLPRF GVSQRTARNP QLLSWRIYRG ARP