Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2015 |
Symbol | |
ID | 3716114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2297622 |
End bp | 2298623 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_347747 |
Protein GI | 77458242 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCA AACAACTGAT TAAACGCACC AGCGGCTGGC TCTATCTAAA CTCGTCCGTG GGACGCAACC AGTTGCAAGG CGCAGGTGTG ATCCTGATGT TGCACCGCGT GTTGTCCAAT GATCGCGCCG CCGACCTGCC GCACCGCAAC GAACTGTGCG TCGGGCCCAA GGCCTTCGAA CACTTGCTGG TGTGGCTGCG CAAGCATTTC GATTGCGTGC CGCTGATGGA GATCCTGCAA CCCAATGCCT TGCGCACCGA GCGTCCGCAG GTGGCGCTGA CCTTCGACGA CGGCTGGCGC GACAACGCCG CCAACGCTTT TCCGCTGCTG CAGAAACATC AGGTGCCGGC GAGCATTTTT CTTTCCACCG ATTTCATCGG CAGCCGGCAG CGTTTCTGGT GGGAAAGCAT CGGCGAAACC CTGTGGGGCA GTCATGGTGA AAAAGCCCGC ACGCACCTGA TCGAATGCCT GCGTGCCGCC GGCCAGCCGT TGCCAGTGCT GCTGGACGAC ATCGATGTGG ATCGCCGCAG TCTGACCCTG TTGCATTATC TGCAAAGCCT CAAGGCGCTC GATCCGAAGA TACTCGAACG CCTGACCGAC GAGTGCCCGC AAGAGTCGCA ACCCCAGGCA CTCGACTGGC ATCAGGTGCG GGCGATGGAG TCTTCCGGTC TGGTGCGTTT CGGCCCCCAC GGCGCCAGTC ACGCGATCCT CACCGGCCTG GACGACGTGC GCCTGAGCGA AGAAATCAGC CGCAGCAGCG ATGCCCTGAA CAACGGCTGC AACCGGCCGT TGCCGGTGTA TTGCTATCCC AACGGGGACA ACGATGAGCG TGTGCGCGAA CAGGTTGCCA ATCACGATTA CCCGTTCGCC CTCGGCACCG GCACCGGCCT CTATCGCGGC ACAGGCGATC CGCTGAACCT GCCGCGCTTC GGTGTCAGCC AGCGCACAGC GCGCAATCCG CAACTGCTGT CGTGGCGGAT CTACCGTGGA GCGCGGCCAT GA
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Protein sequence | MAIKQLIKRT SGWLYLNSSV GRNQLQGAGV ILMLHRVLSN DRAADLPHRN ELCVGPKAFE HLLVWLRKHF DCVPLMEILQ PNALRTERPQ VALTFDDGWR DNAANAFPLL QKHQVPASIF LSTDFIGSRQ RFWWESIGET LWGSHGEKAR THLIECLRAA GQPLPVLLDD IDVDRRSLTL LHYLQSLKAL DPKILERLTD ECPQESQPQA LDWHQVRAME SSGLVRFGPH GASHAILTGL DDVRLSEEIS RSSDALNNGC NRPLPVYCYP NGDNDERVRE QVANHDYPFA LGTGTGLYRG TGDPLNLPRF GVSQRTARNP QLLSWRIYRG ARP
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