| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1976 |
|---|
| Symbol | |
|---|
| ID | 3716249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2256942 |
|---|
| End bp | 2258864 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_347708 |
|---|
| Protein GI | 77458203 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.699737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGA TCATCAACAT CATCGGCGTC TGCCTGCTGG CCATGGCCGG CGCGCTGCTC
ACGCTGAGCG AGATTGCCTT GGCGCAAACC GGCGCCGGGC AGGTGCTGAC CCGCGACGGC
GTGTCGATCA CCTTCGATCT GAAGCCGCTG GCCAGCGACG GCCAGTTGCG TGAGGGCGAG
TTTGCCGACG TGCAATTTCG CGTCACCGAC GGCGCCTCCG GCCAGCCGTT GTCCGGTGTG
GCACCGGGGG CGTGGATCGA TCCGCAAGCC GTCGCCGCCG ACCAGGCCCA GGGCCGTGAC
CAGAGCTGCA AGTCGCGGGT CGGCACGTTC CTCAAGTCCA ACATCGGCGC GCGGCCGCTG
CTCGACCTCA ACAGCTATTT CCTGCTGGTG ATGAACCGCG ATGCCAGTGT TTCGGTGGTT
GATCCGTCCG TCTCGGTCGG CGGCATTACC AGCACCCTGG CGCGGATCGA ACTCAAGCAA
TCGCCGATGG ACTGGGTCAC GCCCAAGGAC AACAAAAAGG TCTTCGTGTC GATGCCGACG
GCGGGGGAAG TGGCGGTGAT CGACAGCGAG CAATTCAAGG TCATCGACTC GGTGGCCGCC
GGCAGCCAAC CGGTGCGGGT CGCCCTGCAA CCGGACGAGC GCCTGCTGTG GGTCGGCAAC
AACGCGAGCA AGGCTGAAGA GTCCGGCGTT ACGGTGATCG ACACCCAGAG CCTCAAGCCG
CTGAAACACT TGGCGACCGG ACGCGGCCAC CATGAAATCA CCTTCAGCAA GGACAGCCGT
TTCGCCTTCG TCAGCAACCG CGACGACGGC ACCCTGAGCG TCATCGACGT CGCCAGCCTG
AGCCTGCTGC AACAGATCAA GACCGGCTCC AGCCCGTTGT CGGTGGCGTA TTCGCCGTTG
TCCGGCGCGG TGTACGTGGC CGATGGCAAG GACGGCACCG TCACCGTGAT CGACAGCAAC
AGCCGCGCCG TACGCCGGGT GATCAAGCTG CAACAGGGCC TCGGCCCGAT GGACTTCAGC
GCCGACGGCC GTTTTGGCGT GGTGCTGAAC ACGGTGGAAA ACCGCGCCAC GGTCATCGAT
GCGGCCAACG ATTCGGCGAT CCATGACCTG GAGGTTTCAG CCGAACCCTA TCAAGTGGTG
TTCACCCAGG CCTATGCCTA CGTGCGCGGA CTGGCCTCGC CGAAAGTCAC CATGATCAAC
CTGTCTTCGC TGGGCGAAGG GCGTCAGCCG ATTACTCAGG GTTTCGAAGC CGGGCCGCAG
CCGCCACGGC TGGCCGGGGA TTTGCCGCTG GCGTCAAGCC TTGCGGTATC GCGCGATGAC
AACGCGGTGT TCGTGGTCAA CCCGGTGGAC AACACCACCT ATTTCTACGC CGAAGGCATG
AACGCGCCGA TGTCCGGTTA CCCCAACCGG GGGCAAATCG CCCGCGCCGC GCTGGTGATC
GACCGCAGCC TGCGCGAAGT GTCGCCGGGG CTCTACAGCG CCCGGGTCAA GCTGCCAGCG
GCGGGGCGCT TCGACGTGGC GTTCCTGCTC AACCAGCCGA ACATCATTCA TTGCTTCACC
GCCCAGGTAG CGTCCGACGG CGCGCCGGAA AAACACCTGG GGGCGGCAAA AGTCGAGTTC
CTGCTGGACA AGACCGCCGT GGCCCTCAAC GACCCCTACG TGGTGCGGTT CCGCATCGTC
CAAGGCAAAC AGAAGACCCA ACGCAGCGGC GTGACCGACG TGCAGTTGCG CTACTTCCTC
GCGCCGACTT CCCGGCCCCG TGAAGTGGCG GCACTGGAAG TCGCCGACGG CGTGTACGAA
GCACCGGTGA CCCTCGACCG CAGCGGCGCC TGGTACCTGC ACGTGCGCGC GGCCTCGCTG
GGCGCCGGTT TCGACGACAA GACCTTTGCC AGTGTCCGGG TGCTGCCCGG CCAGACTCAG
TGA
|
|---|
| Protein sequence | MNRIINIIGV CLLAMAGALL TLSEIALAQT GAGQVLTRDG VSITFDLKPL ASDGQLREGE
FADVQFRVTD GASGQPLSGV APGAWIDPQA VAADQAQGRD QSCKSRVGTF LKSNIGARPL
LDLNSYFLLV MNRDASVSVV DPSVSVGGIT STLARIELKQ SPMDWVTPKD NKKVFVSMPT
AGEVAVIDSE QFKVIDSVAA GSQPVRVALQ PDERLLWVGN NASKAEESGV TVIDTQSLKP
LKHLATGRGH HEITFSKDSR FAFVSNRDDG TLSVIDVASL SLLQQIKTGS SPLSVAYSPL
SGAVYVADGK DGTVTVIDSN SRAVRRVIKL QQGLGPMDFS ADGRFGVVLN TVENRATVID
AANDSAIHDL EVSAEPYQVV FTQAYAYVRG LASPKVTMIN LSSLGEGRQP ITQGFEAGPQ
PPRLAGDLPL ASSLAVSRDD NAVFVVNPVD NTTYFYAEGM NAPMSGYPNR GQIARAALVI
DRSLREVSPG LYSARVKLPA AGRFDVAFLL NQPNIIHCFT AQVASDGAPE KHLGAAKVEF
LLDKTAVALN DPYVVRFRIV QGKQKTQRSG VTDVQLRYFL APTSRPREVA ALEVADGVYE
APVTLDRSGA WYLHVRAASL GAGFDDKTFA SVRVLPGQTQ
|
|---|
| |