| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1954 |
|---|
| Symbol | |
|---|
| ID | 3716266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2228663 |
|---|
| End bp | 2229538 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_347686 |
|---|
| Protein GI | 77458181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGG ATGATGCAAG GGTGTTTCTA GCGGTCTGCC GCGAGTCGAC ATTGCGCGGG
GCCGCGCGTG TACTGGGCGT GGATCAGGCG ACAGTCGGGC GCCGCATCAC GGCACTGGAA
AAGTCGCTGG GCGCGACCTT GTTCCTGCGC ACCTCCGAGG GCTATGCACT GACGGCAGTC
GGCGAAGCGG CGCTCAAGTC GGTGGAAAAA ATGGAGCATT CGGCGCTGGA ACTGGAGCGG
CGTATCCAGG GCCTGGACGA CCGCCTGACC GGCAGTGTGC GGGTCAGCAC CACCGATTCG
CTGGCCATCG ACTTTCTGAT CCCGGCGATG GCGCAGTTGC ACGAACAGCA TCCCGACGTG
CGCGTGCAAC TGGACGCCTC CACACAGATC CTCAGCCTGG CCAAACGCGA AGCGGACATC
GCCGTGCGCA ATACCCGTCC AGACAATCCG GACTTGATCG CCCGGCGCAT CGCGCGTTGG
CCGGTGGGGC TGTTTGCCTC GCAGGCTTAT GTCGACAGCC ATGGCGTACC GGCACCGGGC
AGTTCGTTCG AGGGCCACGA TCTGGTGGTT TACGAGCCGT ATCTGCAGGG CAACAAGGAT
CTGACCCTGG TGTCCGAGCC CATGACTCGC GGGCGGATCG TCGCCGGTCT GAGTTCCAGT
CTGCTGGTGC GGCGCTCGAT TGCCGCCGGT CTGGGTGTAG GAGAAATCCC GGTCTACATG
GGCGAGCGTG ATGGTCTGGT CAGGCTGTGG CCGGAACGTA CGCGGCCGTT ACCTTATGAA
GTGTGGCTGG TGACCCATGC GGATTTACGC CACACCGCGC GGGTCAGGGC GGTGATCGAA
CACATCGTCG AGGCCTTTAT GTCGGAAAAC GAGTAG
|
|---|
| Protein sequence | MNWDDARVFL AVCRESTLRG AARVLGVDQA TVGRRITALE KSLGATLFLR TSEGYALTAV
GEAALKSVEK MEHSALELER RIQGLDDRLT GSVRVSTTDS LAIDFLIPAM AQLHEQHPDV
RVQLDASTQI LSLAKREADI AVRNTRPDNP DLIARRIARW PVGLFASQAY VDSHGVPAPG
SSFEGHDLVV YEPYLQGNKD LTLVSEPMTR GRIVAGLSSS LLVRRSIAAG LGVGEIPVYM
GERDGLVRLW PERTRPLPYE VWLVTHADLR HTARVRAVIE HIVEAFMSEN E
|
|---|
| |