Gene Pfl01_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1945 
Symbol 
ID3716257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2219297 
End bp2220844 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content61% 
IMG OID 
ProductTROVE 
Protein accessionYP_347677 
Protein GI77458172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACT TCAACCTCTT CAACACGCAA TCGAAAAACC TGCCGGCGTG CGACACCTTG 
AATGCTTCCG GAGCTGCGGC TTATGCCTAC ACGCCCAAGC ATCAGCTGGC CCAGCTGGCA
GTCACCGGTT GCCTGAATTC GACCTTTTAC GCATCCGCTC AAAGTCAGTT GGATCAGGTG
TTGAAGCTGG TGGCAGAGCT GGACAGCCGC TTCGTGGCGA ATGCCGCTCT TTATGCTCGC
CAGAAGGGCC ATATGAAAGA CATGCCGGCC TTATTGCTGG CGGCGCTGGC GGCTCAGCGC
TCGGCGCTGG TGCCGGAGGT GTTCGGGCAG GTCGTGGACA GCGGCAAGAT GCTGCGCAAT
TTCGTGCAGA TCCTGCGCAG TGGCGCCACC GGTCGCCGAT CCTTGGGCTC CCAACCCAAG
CGTCTGGTGC AGAACTGGCT GAACAGCGCG ACCGAGCGAC AGCTGCTGCA GGCATCGATC
GGCAATCAGC CTTCGCTGGC GGATGTGGTG AAGATGGTTC ACCCAAAACC GTCCGAGGCC
TGGCGTGAAG CGTTTTTTGC CTGGGTGATC GGCAAGCCGG TGGATGCAAA GGCGTTGCCC
GCACTGACTC GCGATTTGCT GGCCTTTCGC AGCGGTGCGA GTGAGCAAGT GCCTGAAGTG
CCTTTTCAAT TGCTCGGTAA CGAAACCTTG AGCAAGGAAC AATGGGCAGC TCAGGCGCGG
AACATGGGCT GGCAGGGACT GCGCATCAAC CTCAATACGC TGGCGCGCCA TGGTGCTTTT
GACGTGCCGG GTTGCACCGA ATACGTGGCC GCGCGGTTGG CGGATCCCGA AGCCGTTGCG
AAGGCGCGGG TGTATCCGTA CCAGTTGCTG GCAGCGTACC GGATGGTCGG CGATGACGTG
CCGGCGCTGA TACGCGAGGC TTTGCAGGAT GCGCTGGAGC TCTCATTGAC CAATGTGCCG
AAGCTGCAAG GTGCGGTGGT GGTTTGCCCG GATGTTTCCG GCTCGATGGG CAGCCCGCTG
ACCGGGTATC GTCAGGGCGC GACCACGGCG GTGCGCTGCA TCGATGTGGC GGCATTGATT
ACGGCGGCGG TGTTGCGTAA ACAACCGACG GCACGGGTGA TGCCATTCGA ATGGAAGGTG
GTGGATATCA CCCTCAACCC GCGCGACAGT GTGATCAGCA ATGCCGAAAA GCTTGCAGGC
ATTTTCGGCG GCGGAACCTG CTGCTCGGCG CCGTTGAAGA AACTGGCGGA CAGCAAGGCC
AGGGTCGATA CGCTGATCAT GGTGTCGGAC AACGAATCCT GGATCGATGC GCGACGTCAG
GGCGCCAGCG AGACGATGCT GCAATGGGAG CGGATAAAGC GCATCAATCC CCAGGCACGC
CTGATCTGCA TTGACCTGCA ACCGGGTTGG GCGACACCGG CGGCGGATCG TGACGACATC
CTGAATGTCG GCGGTTTCAG TGACGCGGTG TTTGATGTGA TCGAACAGTT CACTGCCGGC
CGGTACGGAC CGCAGCACTG GGTCGAAGCG ATTGAGCGCA TGGGATGA
 
Protein sequence
MANFNLFNTQ SKNLPACDTL NASGAAAYAY TPKHQLAQLA VTGCLNSTFY ASAQSQLDQV 
LKLVAELDSR FVANAALYAR QKGHMKDMPA LLLAALAAQR SALVPEVFGQ VVDSGKMLRN
FVQILRSGAT GRRSLGSQPK RLVQNWLNSA TERQLLQASI GNQPSLADVV KMVHPKPSEA
WREAFFAWVI GKPVDAKALP ALTRDLLAFR SGASEQVPEV PFQLLGNETL SKEQWAAQAR
NMGWQGLRIN LNTLARHGAF DVPGCTEYVA ARLADPEAVA KARVYPYQLL AAYRMVGDDV
PALIREALQD ALELSLTNVP KLQGAVVVCP DVSGSMGSPL TGYRQGATTA VRCIDVAALI
TAAVLRKQPT ARVMPFEWKV VDITLNPRDS VISNAEKLAG IFGGGTCCSA PLKKLADSKA
RVDTLIMVSD NESWIDARRQ GASETMLQWE RIKRINPQAR LICIDLQPGW ATPAADRDDI
LNVGGFSDAV FDVIEQFTAG RYGPQHWVEA IERMG