| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1855 |
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| Symbol | |
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| ID | 3716369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 2112375 |
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| End bp | 2113769 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_347587 |
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| Protein GI | 77458082 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.859631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.291675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC AACTGAGCCT GTTGACCCTT TGCCTGATGC TGAGCGCCTG CGGCAGCCCC
GCGCCACGCC CGGAAAGCGG CGTGACCGCC CCCGCCGCGT GGCAGTCGCC GACCGGGCAA
TCGGTGGCGC AGACCAACCA GCAATGGTGG ACGCATTTCG CCAGCCCGCA TCTGAACCTG
CTGATCGGGC AGGCGCAAAG CGGCAGCCAC GACCTGGCCG CCGCCATTGC CCGCGTACGT
CAGGCACGCG CCAGCACAGT GATCGCGGGC GGTTCGCAAT TACCGGAACT AACCGCAGGC
CTGAACGCCA ACCGCCAGAA ACTGCTGCGC GGCAACGGCT ACAGCCAACT GGATGCCGAC
AGCAGCAACA AGGCCGTGGA CTACTTCGAC GCCAACCTCA GCGCGAGTTA TGAAATCGAC
TTCTGGGGCG GTCAGGCCGC CACCCGCGAG AGCGCCCGCC AGGGCCTGCG CGCGAGTGAG
TTCGATCAGG CCACCGTGGA ATTGACCCTG CTCAGCGACG TCGCCAACCG CTACACCCAG
GCGTTGTCAT TGCAGGAACA AAGCCGCATT GCCGCGCTGA ACCTGGCCAA CGCGCAGAGT
GTCTTGCAAC TGGTGCAGAC CCGCTTCAAT GCCGGCTCCG CCACCGCGCT GGAACTGGCT
CAGCAGAAAA GTCTGGTGGC CGCGCAACAG CGGCAACTGC CGACGGTGCA GCAACAGGCC
GAGGACGCGC GAATCGGTCT GGCGGCACTG CTCGGGCGAC CGGTGCAAGA GCTGCCACCG
AGCCTCGAGT CGTTCGACCA ACTGCAGTGG CCACAAATCG CTGCCGGGCT GCCCAGCGAC
CTGCTGACCC GACGCCCGGA CATCGCCCGC GCCGAAGCGC AACTGGCAGC CGCCCGGGCA
GACGTCAAAG TCGCCCGCGC CGCCATGCTG CCCAAGGTCA CCCTGAGCGC GCAGCTGGGC
TCCGGCGCCA ACCGCTTCGA CGATGTGATG CGTAGCCCGT TCTACAACCT CACCGCCGGG
CTGATCGCAC CGATCTTCAA TAACGGTCGC CTGTCCGCAG AACGCGACAA GGCGACCGCC
CGCCAGGAAG AACTGCTGGA AACCTATCGC GGCGCGATCA TCAACGGCTT CGCCGACGTG
GAAAAAGCCC TGAACAGCAT TCAGGGCCTG GATCAACAAC GGCAATGGCA GACCGAAGAG
CTGAATCAGG CACAGACCGC GTTCAACCTC TCCCAGAGCC GCTATCAGGC CGGCGCCGAA
GACTTGCTGA CCGTACTGGA AACCCAGCGC ACGCTGTACG CCGCGCAGGA TCTCAACGTG
CAACTGCGGC TGGCGCGGAT GCAGGCGAGC ATTGCGCTGT ACAAAGCGTT GGGTGGGGGT
TGGGAGACGC GCTGA
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| Protein sequence | MKPQLSLLTL CLMLSACGSP APRPESGVTA PAAWQSPTGQ SVAQTNQQWW THFASPHLNL
LIGQAQSGSH DLAAAIARVR QARASTVIAG GSQLPELTAG LNANRQKLLR GNGYSQLDAD
SSNKAVDYFD ANLSASYEID FWGGQAATRE SARQGLRASE FDQATVELTL LSDVANRYTQ
ALSLQEQSRI AALNLANAQS VLQLVQTRFN AGSATALELA QQKSLVAAQQ RQLPTVQQQA
EDARIGLAAL LGRPVQELPP SLESFDQLQW PQIAAGLPSD LLTRRPDIAR AEAQLAAARA
DVKVARAAML PKVTLSAQLG SGANRFDDVM RSPFYNLTAG LIAPIFNNGR LSAERDKATA
RQEELLETYR GAIINGFADV EKALNSIQGL DQQRQWQTEE LNQAQTAFNL SQSRYQAGAE
DLLTVLETQR TLYAAQDLNV QLRLARMQAS IALYKALGGG WETR
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