Gene Pfl01_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1842 
Symbol 
ID3716395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2060972 
End bp2062144 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content66% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_347574 
Protein GI77458069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.570111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACC CTTACCGCGA GTTGTTCAAC GCCCCCGGCG CCCGGGCTTT TGTGATGGCC 
GCGATGATCG CGCGCATGCC GATTTCCATG ACCGGCATCG GTGTCATCAC CATGCTCTCG
CAATTGACCG GCGGTTACGC GCTGGCGGGT GGGGTGGCGG CGACGTTTGC GTTGGCCACG
GCGTTTTGCG CGCCGCAGGT GTCACGGCTG GTGGACCGTT TCGGCCAGGG TCGGGTGCTG
CCGGTGGCGG CGCTGATCGG CGGGGGCGCG CTGCTGATGT TGCTGCTGTG CACCCGTTTG
CAGGCGCCGA CCTGGACCCT GTTTGTGTGC GCAGCATTGG CCGGTTGCAT GCCGAGCATG
TCGGCGATGG CGCGGGCACG CTGGACCGAA ATCTATCGCG GCCAGCCGCA ATTGCAGACC
GCTTATGCAT TGGAGTCGGT GCTCGACGAA GTCTGTTTCA TCGTCGGCCC GCCGTTGTCG
GTGGGCTTGT GCGTCGGCGT GTTTCCCGAG GCCGGGCCAC TGGCGGCGCT GTTGATGCTG
GCGATTGGCG TCACAGCGTT CGTCGCCCAG CGCAGCACCG AGCCGCCGGT GCATCCGCAC
GAATCGCAGC ATCAAGGTTC GATCATTCGT TCCACCGACG TGCAATGGCT GCTGGCGTTG
ATGCTCGCCA TGGGCGTGAT TGTCGGCGTG GTGGATGTGG TCAGCGTCGC GTTCGCCCAG
CAGCAGGAGC AGCCGGCGGC GGCGAGCATC GTGCTGTCGG TGTATGCCAT CGGCTCCTGT
CTGGCCGGGA TTGCCTTCGG CGCGATGCGC TCGAAGCTGC CGTTGCCGCG CCTGTTTCTC
TACGGCGGTC TGGCGACAGC GGTGACAACG CTGCCGTTGT TGCTGGCGAG CAACATTTTC
GGGTTGGCCG TCGCGGTGTT CATTGCCGGG CTGTTCTTCT CGCCGACCCT GATCGTGGCG
ATGGCGTTGA TCGAGCGCAT CGTACCGCCG GCCAAACTCA CCGAAGGCCT GACCTGGCTG
GTGACCGGTT TGAGCATTGG CGTCGCCATC GGTGCCGCCG GTTCCGGCGC ACTGGTGGAT
GCGTTCGGTG CCCGCAGCGG CTTCTGGCTG GCGATTGCCG CCGGGGCAGT GGTGCTGGGC
TCGGCGGTGC AGAGCTTTCG TCACCTCAAA TAA
 
Protein sequence
MANPYRELFN APGARAFVMA AMIARMPISM TGIGVITMLS QLTGGYALAG GVAATFALAT 
AFCAPQVSRL VDRFGQGRVL PVAALIGGGA LLMLLLCTRL QAPTWTLFVC AALAGCMPSM
SAMARARWTE IYRGQPQLQT AYALESVLDE VCFIVGPPLS VGLCVGVFPE AGPLAALLML
AIGVTAFVAQ RSTEPPVHPH ESQHQGSIIR STDVQWLLAL MLAMGVIVGV VDVVSVAFAQ
QQEQPAAASI VLSVYAIGSC LAGIAFGAMR SKLPLPRLFL YGGLATAVTT LPLLLASNIF
GLAVAVFIAG LFFSPTLIVA MALIERIVPP AKLTEGLTWL VTGLSIGVAI GAAGSGALVD
AFGARSGFWL AIAAGAVVLG SAVQSFRHLK