Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1842 |
Symbol | |
ID | 3716395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2060972 |
End bp | 2062144 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_347574 |
Protein GI | 77458069 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.570111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACC CTTACCGCGA GTTGTTCAAC GCCCCCGGCG CCCGGGCTTT TGTGATGGCC GCGATGATCG CGCGCATGCC GATTTCCATG ACCGGCATCG GTGTCATCAC CATGCTCTCG CAATTGACCG GCGGTTACGC GCTGGCGGGT GGGGTGGCGG CGACGTTTGC GTTGGCCACG GCGTTTTGCG CGCCGCAGGT GTCACGGCTG GTGGACCGTT TCGGCCAGGG TCGGGTGCTG CCGGTGGCGG CGCTGATCGG CGGGGGCGCG CTGCTGATGT TGCTGCTGTG CACCCGTTTG CAGGCGCCGA CCTGGACCCT GTTTGTGTGC GCAGCATTGG CCGGTTGCAT GCCGAGCATG TCGGCGATGG CGCGGGCACG CTGGACCGAA ATCTATCGCG GCCAGCCGCA ATTGCAGACC GCTTATGCAT TGGAGTCGGT GCTCGACGAA GTCTGTTTCA TCGTCGGCCC GCCGTTGTCG GTGGGCTTGT GCGTCGGCGT GTTTCCCGAG GCCGGGCCAC TGGCGGCGCT GTTGATGCTG GCGATTGGCG TCACAGCGTT CGTCGCCCAG CGCAGCACCG AGCCGCCGGT GCATCCGCAC GAATCGCAGC ATCAAGGTTC GATCATTCGT TCCACCGACG TGCAATGGCT GCTGGCGTTG ATGCTCGCCA TGGGCGTGAT TGTCGGCGTG GTGGATGTGG TCAGCGTCGC GTTCGCCCAG CAGCAGGAGC AGCCGGCGGC GGCGAGCATC GTGCTGTCGG TGTATGCCAT CGGCTCCTGT CTGGCCGGGA TTGCCTTCGG CGCGATGCGC TCGAAGCTGC CGTTGCCGCG CCTGTTTCTC TACGGCGGTC TGGCGACAGC GGTGACAACG CTGCCGTTGT TGCTGGCGAG CAACATTTTC GGGTTGGCCG TCGCGGTGTT CATTGCCGGG CTGTTCTTCT CGCCGACCCT GATCGTGGCG ATGGCGTTGA TCGAGCGCAT CGTACCGCCG GCCAAACTCA CCGAAGGCCT GACCTGGCTG GTGACCGGTT TGAGCATTGG CGTCGCCATC GGTGCCGCCG GTTCCGGCGC ACTGGTGGAT GCGTTCGGTG CCCGCAGCGG CTTCTGGCTG GCGATTGCCG CCGGGGCAGT GGTGCTGGGC TCGGCGGTGC AGAGCTTTCG TCACCTCAAA TAA
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Protein sequence | MANPYRELFN APGARAFVMA AMIARMPISM TGIGVITMLS QLTGGYALAG GVAATFALAT AFCAPQVSRL VDRFGQGRVL PVAALIGGGA LLMLLLCTRL QAPTWTLFVC AALAGCMPSM SAMARARWTE IYRGQPQLQT AYALESVLDE VCFIVGPPLS VGLCVGVFPE AGPLAALLML AIGVTAFVAQ RSTEPPVHPH ESQHQGSIIR STDVQWLLAL MLAMGVIVGV VDVVSVAFAQ QQEQPAAASI VLSVYAIGSC LAGIAFGAMR SKLPLPRLFL YGGLATAVTT LPLLLASNIF GLAVAVFIAG LFFSPTLIVA MALIERIVPP AKLTEGLTWL VTGLSIGVAI GAAGSGALVD AFGARSGFWL AIAAGAVVLG SAVQSFRHLK
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