Gene Pfl01_1670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1670 
Symbol 
ID3716733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1862458 
End bp1864275 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347402 
Protein GI77457897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000354667 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0752572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATCT TGCGCCTCTT ATACCGTGTG TTGACGCTGA TCGTGTTGCT GCTGGGACTG 
GCTCTGGCGG TGGTTGTTTA CTATGTCGCC AATCCGAGAT TGCCCTTCCC CGCACCTGCA
AAACAGGTGC ATTACCTGAA CCAGTGGACT GAGCAAGAGC GCCAGACCTA CTACTTCACC
CCGCAGGGAA CGCAGGTCAA AGGCCTGCAC TATGAATGGT TCCAGGCGCT GGAGCTGCCG
TTCTCGCAGC AACGCTTTGC CTCCCCGGAA TACCTCGCGC GCTTCGGCTT TCTGATCGAT
CCGCAGCAAA AAGCCACGCC GGACAACCCG GGGAATCTGC CGGTGGGTTT CGCCCGGCAC
CAGAATCCCG GCAGCTCCGA GCAATATCTC GACATCACTT GCGCGGCCTG CCACACCGGG
GAACTGCACT TCAATGGCCA GGCAGTGCGC ATCGACGGCG GTTCGGCCCA GCATGTTCTG
CCTTCCAGCG TTCCTACATT GCGCGGCGGC AGTTTCGGAC AGGCATTGGT CGCCAGTCTC
GCCTCGACCT ACTACAACCC ATGGAAATTC GAGCGCTTCG CCCGCCACGT GCTGGGCAAT
GACTACGAAG CACGCCACGA ACAACTGCGC AAAGAATTCA AAAGCTCACT GAACACCTTC
ATCAAAGTGG CCTGGAACGA CACTCACCGT GGCCTCTACC CCACCGAAGA AGGCCCGGGC
CGCACCGATG CCTTCGGGCG TATCGCCAAC GCGACCTTCG GCGATGCGAT ATCCCCAAAC
AATTACCGCG TGGCCAATGC CCCGGTGGAT TACCCACAGC TGTGGGACAT GTGGACCTTC
GACTGGGTGC AGTGGAACGG CTCGGCGCAA CAACCGATGG CGCGCAATAT CGGCGAGGCT
TTGGGCGTCG GTGCCACGCT GAATTTCTTC GACGCCAACG GCCAGCCGCT GCAAGGCGAT
GAGCGCTATG CCTCCAGCGT ACGTGTGCGT GATCTGCACA AGATCGAAGA AACCCTGCAA
AGACTGCGAC CGCCGGCATG GCCTGAGGAG TTGCTCGGCG TCGTCGACAG ACCCTTGGCA
GCGAAGGGGC GAGCCCTGTT CGCCGAGAAT TGCGCCGGAT GCCACGTCCC GCGTCAAACC
CAGGAAGGCG AGCGTTGGGT GCAACACCTG CACATGCTCC CGGTGGACGT TATCGGCACC
GACCCGAACG CCGCCAACAA CATCGCCAAT CACCGTTTCG ACCTGACCGC TCTGCAATGG
AACCCGGCGG AACTCGAACA AATGGACGTG AAGTTGCACC CCAAACCCAA GGAGCCGCTG
GACCTCAGCC AGTTGTCAGT GGCCAAGGGA CTGGCTTACG TCACCGCCTT CGTGGAAAAC
CGTGCATACC GTGAAGCGGG CGTCACCGCT GCCGAGAAAC CACAGCTCGA TGGCTTCGGT
CTGCCGATCG GCGTTCGCGA AAAAGTCGCC TACAAAGCGC GTCCGCTCGC CGGCGTATGG
GCCACGGCCC CATTCCTGCA CAACGGCTCG GTGCCGAGCC TTTATCAGTT GCTGTCGCCT
CAGGACGAGC GCGCCACCAC CTTCTATAAA GGCACCTTCG AATACGACCC GCGCCATCTG
GGCTATCGCA CCGAAGCTTT CACCAACGGT TTCCTGTTCG ACACCCGCAT CACCGGCAAC
CACAACAGCG GCCACGAATT TCGCGCCGGC GAACGCGGCA ACGGCGTCAT CGGCCGACTG
CTGCAGCCAG AAGAGCGCTG GGCGCTGCTC GAATACCTGA AAGTGCTGGG CGGCCCGCTG
GAGGCGCAAC TGCCATGA
 
Protein sequence
MFILRLLYRV LTLIVLLLGL ALAVVVYYVA NPRLPFPAPA KQVHYLNQWT EQERQTYYFT 
PQGTQVKGLH YEWFQALELP FSQQRFASPE YLARFGFLID PQQKATPDNP GNLPVGFARH
QNPGSSEQYL DITCAACHTG ELHFNGQAVR IDGGSAQHVL PSSVPTLRGG SFGQALVASL
ASTYYNPWKF ERFARHVLGN DYEARHEQLR KEFKSSLNTF IKVAWNDTHR GLYPTEEGPG
RTDAFGRIAN ATFGDAISPN NYRVANAPVD YPQLWDMWTF DWVQWNGSAQ QPMARNIGEA
LGVGATLNFF DANGQPLQGD ERYASSVRVR DLHKIEETLQ RLRPPAWPEE LLGVVDRPLA
AKGRALFAEN CAGCHVPRQT QEGERWVQHL HMLPVDVIGT DPNAANNIAN HRFDLTALQW
NPAELEQMDV KLHPKPKEPL DLSQLSVAKG LAYVTAFVEN RAYREAGVTA AEKPQLDGFG
LPIGVREKVA YKARPLAGVW ATAPFLHNGS VPSLYQLLSP QDERATTFYK GTFEYDPRHL
GYRTEAFTNG FLFDTRITGN HNSGHEFRAG ERGNGVIGRL LQPEERWALL EYLKVLGGPL
EAQLP