Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1670 |
Symbol | |
ID | 3716733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1862458 |
End bp | 1864275 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_347402 |
Protein GI | 77457897 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000354667 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0752572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTATCT TGCGCCTCTT ATACCGTGTG TTGACGCTGA TCGTGTTGCT GCTGGGACTG GCTCTGGCGG TGGTTGTTTA CTATGTCGCC AATCCGAGAT TGCCCTTCCC CGCACCTGCA AAACAGGTGC ATTACCTGAA CCAGTGGACT GAGCAAGAGC GCCAGACCTA CTACTTCACC CCGCAGGGAA CGCAGGTCAA AGGCCTGCAC TATGAATGGT TCCAGGCGCT GGAGCTGCCG TTCTCGCAGC AACGCTTTGC CTCCCCGGAA TACCTCGCGC GCTTCGGCTT TCTGATCGAT CCGCAGCAAA AAGCCACGCC GGACAACCCG GGGAATCTGC CGGTGGGTTT CGCCCGGCAC CAGAATCCCG GCAGCTCCGA GCAATATCTC GACATCACTT GCGCGGCCTG CCACACCGGG GAACTGCACT TCAATGGCCA GGCAGTGCGC ATCGACGGCG GTTCGGCCCA GCATGTTCTG CCTTCCAGCG TTCCTACATT GCGCGGCGGC AGTTTCGGAC AGGCATTGGT CGCCAGTCTC GCCTCGACCT ACTACAACCC ATGGAAATTC GAGCGCTTCG CCCGCCACGT GCTGGGCAAT GACTACGAAG CACGCCACGA ACAACTGCGC AAAGAATTCA AAAGCTCACT GAACACCTTC ATCAAAGTGG CCTGGAACGA CACTCACCGT GGCCTCTACC CCACCGAAGA AGGCCCGGGC CGCACCGATG CCTTCGGGCG TATCGCCAAC GCGACCTTCG GCGATGCGAT ATCCCCAAAC AATTACCGCG TGGCCAATGC CCCGGTGGAT TACCCACAGC TGTGGGACAT GTGGACCTTC GACTGGGTGC AGTGGAACGG CTCGGCGCAA CAACCGATGG CGCGCAATAT CGGCGAGGCT TTGGGCGTCG GTGCCACGCT GAATTTCTTC GACGCCAACG GCCAGCCGCT GCAAGGCGAT GAGCGCTATG CCTCCAGCGT ACGTGTGCGT GATCTGCACA AGATCGAAGA AACCCTGCAA AGACTGCGAC CGCCGGCATG GCCTGAGGAG TTGCTCGGCG TCGTCGACAG ACCCTTGGCA GCGAAGGGGC GAGCCCTGTT CGCCGAGAAT TGCGCCGGAT GCCACGTCCC GCGTCAAACC CAGGAAGGCG AGCGTTGGGT GCAACACCTG CACATGCTCC CGGTGGACGT TATCGGCACC GACCCGAACG CCGCCAACAA CATCGCCAAT CACCGTTTCG ACCTGACCGC TCTGCAATGG AACCCGGCGG AACTCGAACA AATGGACGTG AAGTTGCACC CCAAACCCAA GGAGCCGCTG GACCTCAGCC AGTTGTCAGT GGCCAAGGGA CTGGCTTACG TCACCGCCTT CGTGGAAAAC CGTGCATACC GTGAAGCGGG CGTCACCGCT GCCGAGAAAC CACAGCTCGA TGGCTTCGGT CTGCCGATCG GCGTTCGCGA AAAAGTCGCC TACAAAGCGC GTCCGCTCGC CGGCGTATGG GCCACGGCCC CATTCCTGCA CAACGGCTCG GTGCCGAGCC TTTATCAGTT GCTGTCGCCT CAGGACGAGC GCGCCACCAC CTTCTATAAA GGCACCTTCG AATACGACCC GCGCCATCTG GGCTATCGCA CCGAAGCTTT CACCAACGGT TTCCTGTTCG ACACCCGCAT CACCGGCAAC CACAACAGCG GCCACGAATT TCGCGCCGGC GAACGCGGCA ACGGCGTCAT CGGCCGACTG CTGCAGCCAG AAGAGCGCTG GGCGCTGCTC GAATACCTGA AAGTGCTGGG CGGCCCGCTG GAGGCGCAAC TGCCATGA
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Protein sequence | MFILRLLYRV LTLIVLLLGL ALAVVVYYVA NPRLPFPAPA KQVHYLNQWT EQERQTYYFT PQGTQVKGLH YEWFQALELP FSQQRFASPE YLARFGFLID PQQKATPDNP GNLPVGFARH QNPGSSEQYL DITCAACHTG ELHFNGQAVR IDGGSAQHVL PSSVPTLRGG SFGQALVASL ASTYYNPWKF ERFARHVLGN DYEARHEQLR KEFKSSLNTF IKVAWNDTHR GLYPTEEGPG RTDAFGRIAN ATFGDAISPN NYRVANAPVD YPQLWDMWTF DWVQWNGSAQ QPMARNIGEA LGVGATLNFF DANGQPLQGD ERYASSVRVR DLHKIEETLQ RLRPPAWPEE LLGVVDRPLA AKGRALFAEN CAGCHVPRQT QEGERWVQHL HMLPVDVIGT DPNAANNIAN HRFDLTALQW NPAELEQMDV KLHPKPKEPL DLSQLSVAKG LAYVTAFVEN RAYREAGVTA AEKPQLDGFG LPIGVREKVA YKARPLAGVW ATAPFLHNGS VPSLYQLLSP QDERATTFYK GTFEYDPRHL GYRTEAFTNG FLFDTRITGN HNSGHEFRAG ERGNGVIGRL LQPEERWALL EYLKVLGGPL EAQLP
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