| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1662 |
|---|
| Symbol | |
|---|
| ID | 3716796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1853224 |
|---|
| End bp | 1854411 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_347394 |
|---|
| Protein GI | 77457889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.195999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00862615 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC TTGCTTCCAA CCGTTCCAGC CTGTGGTTTC TGGCGATCAC CTTACTGAGT
TTTCTCGCCG CTTCCACTGC GCCGACGCCG TTGTATCACC TGTATCAGGA TCAGCTGCAT
TTTTCGGCAG CGGTACTGAC CCTGATTTTT GGCGTCTACG CCCTCAGTCT GCTGGCCGCG
TTGCTGACGG TCGGGTCGCT CTCGGATCAC TTGGGACGCA AACCGGTGAT CTTCACCGCC
GTGACGTTCA ATGCGCTGGC GATGCTGTTG TTCATCTATG CCGACAGCGT GGGTTGGCTG
ATCGGCGCGC GAGTGCTGCA AGGTTTCGCC ACCGGCATGG CCACCGCCGT GTTGAGCGCG
ACACTGCTGG ACACTGACCG CCAGCAGGGG CCGTTGATCA ACAGCGTTGC GCCTTTGCTG
GGCATGGCGT TGGGCGGCAT GGGCTGCGGT TTGCTGGCGG AATTCGCCCC GGCGCCGTTG
CAATTGACCT ATTGGCTGCT GCTCGCGCTG TTTGTGTTGC AGGGCATTTA TGTCTGGCGC
CTGCCGGAAA GCGTCTCGCC GCAGGCCGGA GCGTGGGCCT CGTTACGGCC GACCCTGCAC
GTGCCGGTTC AGGCCCGCTC GACGCTGTGG CGAGTGTTGC CGCTGAACAC CGCGACCTGG
GCGCTCGGCG GCTTCTATGC CTCGCTGGCG CCGTCGCTGG TGCGCACGGC CACCGGCTCC
ACCTCCAATC TGATCGGCGG CGCGACCGTG GCGGCGCTGA CCGTGACCGG TGCATTGATG
ATCTTCACGT TGCGCAATCG TCCTGCCTCC CGCGCGCTGC AACTCGGGGC GAGTCTGCTG
CCGGCCGGTG TCGTGCTGAT TCTGTTGGGC GTGCACAGCG CCAGCCTGTC GCTGTTCTTC
TTCGGCACGC TGGTGGCCGG TTGTGGCTTT GGCTCCGGTT TTCTCGGCGC TGTGCGCAGC
CTGGTGCCGC TGGCGTTGCC CCATGAGCGG GCTGGTTTGA TGTCGGCGTT TTATGTGCTG
AGTTACCTGG CGTTCTGCCT GCCGGCGTTG CTGGCAGGGC ACTTCACTCA TAGCGTGGGC
CTGCTGGCCA CCACCGATGT GTATGGTGCA GTGCTGATCG TGTTGGCGGT CGGTGCGCTG
TTGATGAGTT TCCGGGCGCA AGCGGCGAAG ACCTGCAGCG CTCCATAA
|
|---|
| Protein sequence | MTSLASNRSS LWFLAITLLS FLAASTAPTP LYHLYQDQLH FSAAVLTLIF GVYALSLLAA
LLTVGSLSDH LGRKPVIFTA VTFNALAMLL FIYADSVGWL IGARVLQGFA TGMATAVLSA
TLLDTDRQQG PLINSVAPLL GMALGGMGCG LLAEFAPAPL QLTYWLLLAL FVLQGIYVWR
LPESVSPQAG AWASLRPTLH VPVQARSTLW RVLPLNTATW ALGGFYASLA PSLVRTATGS
TSNLIGGATV AALTVTGALM IFTLRNRPAS RALQLGASLL PAGVVLILLG VHSASLSLFF
FGTLVAGCGF GSGFLGAVRS LVPLALPHER AGLMSAFYVL SYLAFCLPAL LAGHFTHSVG
LLATTDVYGA VLIVLAVGAL LMSFRAQAAK TCSAP
|
|---|
| |