Gene Pfl01_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1574 
Symbol 
ID3716942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1763241 
End bp1764746 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347306 
Protein GI77457801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.800091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCCAC TGTCAAATCT GACAGTAGAC ATCCCGCACT CTGGAGCGCT TAGATGCCTG 
ATCTCCTGTC ACTCAGAAGC GGCTGAGGAG GCGCATCCCG AGATGATCAG AAAATCAGCA
AAGGTTGATG GTACAGGGCC ACAAAACCCC GTCGCAGAAG ACGAGCTGCT CGTTCTGGGC
GCACGCGCCT GTCATCGAGT GGTCGGCACC TTTCGCTCCA ACAGCTACAG ACTTGTGTCT
CTGAACGCCC GGACCCTTGA GCCAATTGAG GCTGTCTGGC AATACGAAGA TCACGATCAA
TCTGTAACGG GAATCGATTT CTTTGATACC AACCCCTCGC CCCCCCTGCT TGTCACCTCG
GGGAAGCAGA GGCTGGTCCT CTCCCGTTCG AACATCATTG GCAACTTCCC TGCCCTGTGC
GCTCTTCGTA ATGATCAAAA ACTGCACGCA TGGGGCTGGG GGGAAAATGG CGGTAATTTG
CCTCCCCGAC TGGCCTGCCT CAGGGATATT CGCGAAGTGG CATCTTCCAT GGCCGCTTTT
GCGGTCAGGC GCGCAAAAGG GAACGTCCTG GCCTGGGGCA GCGCTGGAAA TCCCAGCTCC
TGCGTCCCCG AGGAGATTGC AAAGCGAACC GACATTGTCG CTCTGTACGG AGGGGCCTAT
GCATTTGCGG CACTCCTGTC CACGGGAAAT CTCGTGACAT GGGGATTAAA GGAAACGGGA
GGGGATCTTC CAGACAGGAT TGCCCGACTC TCCGACATTG TGCATGTCCA GGGATCAGAG
TTTGCATTTG CAGCCATACG CAAGAATGGT CACGTGGTGA CTTGGGGCCA CCCGGATTAT
GGCGGTGCTT TGCCTGATGA CATCGGCAAG ATGAGCGGTG TCGTTCAATT GGCAAGCAGC
GGCTTCGCTT ACGCCCTGCG CCGCGATGAC GGAAGTGTTG CCGTCTGGGG CCGTATTGCC
CCCATGCCTG AACGTATTGC CGGGTTGAGG GACATTGTCG ATATACAGGG TAATGCGGGT
GCATTCGCAG TACGTCAGGC GAGTGGCCAA GTTGATGGCT GGGGAGACTT CACCTGGGAT
ACGCCTCCCG CCCCCATTAC TGAATACAGA GACATCGTGC ATTTTAGTCC GACATCGGAT
GGTTTTGTGG TACTGCGCGC CAATGGTCAG GTGGATGCAT GGGGAGCCGG CGCGGCTGCC
AACGTGCCGG ATACGATCAA AGCGCTGACA GATGTGGTGG GGATAAGTAC CAATCATGAG
GCAGCCGTCG CCTTACGCAG CAACGGGGAA GCCGTCGCCT GGGGAGACCC TGAGGCAGGC
GGTGACAGCA GCAACGTTGC TCCTCTGCTT CAAAACGTAC GGGCTGTCTA TGGAGGGACT
CGAACATTCG TCGCACTGAG GGAGGATGCA AGAGTAGTGG CTTGGGGTGA CGCACACAAA
GGTGGCACCG GCGAACAAAA AGCACTCTAC CGACGGATCG CTTACTCAAG GAAGGTTGCG
CCTTGA
 
Protein sequence
MSPLSNLTVD IPHSGALRCL ISCHSEAAEE AHPEMIRKSA KVDGTGPQNP VAEDELLVLG 
ARACHRVVGT FRSNSYRLVS LNARTLEPIE AVWQYEDHDQ SVTGIDFFDT NPSPPLLVTS
GKQRLVLSRS NIIGNFPALC ALRNDQKLHA WGWGENGGNL PPRLACLRDI REVASSMAAF
AVRRAKGNVL AWGSAGNPSS CVPEEIAKRT DIVALYGGAY AFAALLSTGN LVTWGLKETG
GDLPDRIARL SDIVHVQGSE FAFAAIRKNG HVVTWGHPDY GGALPDDIGK MSGVVQLASS
GFAYALRRDD GSVAVWGRIA PMPERIAGLR DIVDIQGNAG AFAVRQASGQ VDGWGDFTWD
TPPAPITEYR DIVHFSPTSD GFVVLRANGQ VDAWGAGAAA NVPDTIKALT DVVGISTNHE
AAVALRSNGE AVAWGDPEAG GDSSNVAPLL QNVRAVYGGT RTFVALREDA RVVAWGDAHK
GGTGEQKALY RRIAYSRKVA P