Gene Pfl01_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1553 
Symbol 
ID3716978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1739580 
End bp1739954 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347285 
Protein GI77457780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00238513 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.335767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC CAACACCCAA TCCGCCCGAA ACCGACCCCG CCTCGCCCTA CGAATCCGCC 
GATTCCAGAA AGCTTCACGA AGCCGCCGAC CGCGCCCTCG ACCACTATCT CTGCCCGCCC
GGCTCCAGGC CACCACCGCG CAAAACCCGC AGAATGTACG CCGTCACCGC AGACTTCAAA
AACGAAGAAC TGCTGGCCGA TGCCTGCGAA ACCCTGGCCT CAGCCAGGAC CATCGTCAAT
GACTTCACCC ACCTCATGCC CGCCTCGCAG CGCAGGACGC TGGTGGGGAT TGCGCAACTG
ATCATGCTCG GCGAGCTGGC AGTGAATCGG GTGCTGGATA ATCTGGAACT GCCGCCATCG
CAGACCTCCG CGTAA
 
Protein sequence
MIKPTPNPPE TDPASPYESA DSRKLHEAAD RALDHYLCPP GSRPPPRKTR RMYAVTADFK 
NEELLADACE TLASARTIVN DFTHLMPASQ RRTLVGIAQL IMLGELAVNR VLDNLELPPS
QTSA