Gene Pfl01_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1543 
Symbol 
ID3717007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1731944 
End bp1732291 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content60% 
IMG OID 
ProductHpt domain-containing protein 
Protein accessionYP_347275 
Protein GI77457770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.964594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.816916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGATA CACATGTGGA CCACGAGGCG CTGAGCGCGC TGCGGGAAGT GATGGAAGAC 
AGCTATCCGG AACTGCTGGA TACCTTCCTC GCCGATTCCG AAAACCGCCT GCGGGAGTTG
CAGCAGACTG CCGATGCCGA CGCATTGTCT TCCGTTGCGC ACAGCTTCAA GGGCAGCAGC
AGCAACATGG GCGCGACCCG TCTTGCCGTG CTGTGCCAGG AGCTGGAACA GCATGCCAAA
GACAAAAGCC CTTCCGAGAT CATCAAACTG GTCGCCGATA TTCATAGCGA ATTCGCCGAT
GTGCGGCCCG TTTATGTCGC CGAGCGGCAG CGCTCGCTGA CGCACTGA
 
Protein sequence
MADTHVDHEA LSALREVMED SYPELLDTFL ADSENRLREL QQTADADALS SVAHSFKGSS 
SNMGATRLAV LCQELEQHAK DKSPSEIIKL VADIHSEFAD VRPVYVAERQ RSLTH