Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1517 |
Symbol | |
ID | 3717020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1703851 |
End bp | 1706775 |
Gene Length | 2925 bp |
Protein Length | 974 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | glycosyl transferase family protein |
Protein accession | YP_347249 |
Protein GI | 77457744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.206981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGCA AGAACAGTTC TGGACACGGT TTGGCACTCA ACGAACAGTT GACCGTTGTG CTGATATCTC ACGAACGCCC GGCGTTTCTG CGCAGGGCCG TGCGTTTCTA CAGCACCCTG CCGTGCAGGA TCCTGGTGCT GGATTCTTCG GCCGAGGCAC AACCGGACAT GCTCGGGCAG TTTGCCAACG TCGACTACCA GCACTTGCCG CAGTATGGCT ACTGGGGCAT CTGCGCCAAG CTGGCCTACG GTGTCGAGCA ATTGCAGACG CCGTACATGG TGTTTGCGGC GGACGACGAC TTCCTCGTGC ACGATGCCTT GCATGAAGCC GTCGCCTTCA TGAATGCCAA CCCCGATTAC AGCCTGTGCC ATGGCTACAG CATGATGTAC CTGTCGCTGG CCAACAGCGT CAGCTACTAC CGTCGCGACA AGAAGGTCTG CGAGGACTAC TCGGCCGATC TCGCCCAGGA TCGCCTGATC GACTACATGT ATCAGTACCT GCCGCCGTTC TATGCCGTGC AACGTACGGA GATTCTGCGC GACTGGTATG CGGCCATGCC GCAAGACACG ATCTTCCAGT GGCAGGAAGT CGGTCACACC TACTACATGC TGGCGCGGGG CAAGGCGCGG ATTCTGCCGA TCCCGTACGT GGTGCGTGAG CTCAACTATC AGCACTCCGA CCACAACACC GAGATTTATC ACTCGCTGGC CTACACCGAC GCCAGGCACG TCGCCGAACG CGAAGCCTTT GCCGGTTTCC TTGCCGGGTT GCCGACCCAG GTCAAGCATC AGGATCCGGA GCAGGGCAAA CAGTTCGTGC TGGATAGCTT CGAAGCACTG GCCGATAGCC TGCGCGCCGG TCGCGCGTTG ACTGCCGAGC TGGTATTCGA GTCGGCCTGG ACCGATATCG AGGCGGGCCC ACAGCGCCGT TTCGGCCCGA AACAGTACGT CGAGATGCCG TTCTACAATC AGGCGTTCTT CGATCAATTG ACCCAGTTCG AATTCCTGCT GCACTCGATG CCGGCAGGGC GCCTGCAGTT GCAAGGCCTG GAAGGCATCT GGGCGCGCCA GCAGAACCTG ATGCTGGCCC GCAACAACGA CACCCCGGAA AGTGTGGTCG ACCGTTTGTG GCAGGCCCAC GACAGCAACG TGTTCAACCG CCAGGTCATC ACGCGTCTGA TTGACCAGTT GCAATCGATG GGCGAAGAAG AGGACGCGCA AAAACTGCGC GACTGGATCG CGCGTCTGCA AGCGACCTCC CTCAAAGGCA ACGATCAGGC ATTCGGCAAG ATGAGGACCG GTCGCCTGCT TGAATGGCTC GCGGCGCGTC AACCGGATGC CGGACAGCTC GAGGCTATCG CCGGTCACCT GGCAGCCCAC GATGGCGGTC CGCAGTTCGG CATCTTCCTG CTCGATCTGG ACAACGACAT CGACAAGTTG CAGATCACCC TGGACAGCCT GCTCGAAGGT CACAGCAAGG CCTTCAAGGT GGTGGTGTTC ACCACGGGTG AGCCGCCGGC CGCGACCACT GCGCAAAACA CTTTGCACTT TGTCCGGGTC TCGCCGAGCA ATTTTGTCGA CAAGCTGAAC CTGAGCGTCA ATCAGTCGCC GTGCGACTGG CTGTTGCTGG CCGAAGCGGG CGACGAGTTC ACCGCCGGCG GTCTGTTGCG CGCCGGTCTG GAGCTGGCGT CTGCCGACGG GTGCCGCGCG GTGGCCACCG ACGAAATCCA GCGCACCGCC GATGGCGCAC TGGTGGATGT CTTCCGTCCG GGCTTCAACC TCGATCTGTT GCAAAGCCTG CCGGCACTGA TGGCACGGCA CTGGTTGATC CGTCGTGAAG TGTTGATCGA GGCCGGTGGT TATCAGGCCG ACTTCAGCAA GGCGCTGGAA TTCGATCTGC TGCTGCGCAT CATTGAGCAA GGTGGTCTGG ATGGCCTGGC TCACCTTGAC GAACCGCTGT TGATTGCCGG TGCTTCGGTG CTGGAAGAAA ACGCCGATGA GCGTCAGGCG CTGCTGCGTC ACCTGGGCAA TCGTGGTTAC AAGGCGAAAA TCACCTCGTC GAAACCGGGC ACTTATCAGG TCGACTACCG TCACGGCGAA CAGCCATTGG TGTCGGTCAT CGTGCCGGCA ATCGATGATC TTCCTGCGCT GCAGCGTTGC ATCGAAGGCG TACTGCTGCG AACCCGCTAC ACCCGCTATG AGGTGTTGAT CGCCGCAGGT CCCAATCTGT CCGCCGCGGT CAATGACTGG CTGGGCACAC TGCAGCACGC CAAGGTGCGG GTCTTGCGTG CCGATCAGCC ACTCGGTGCC GTGGCGCTGA GCAACGCCGC CAGCCAGCAG GCGCAGGGTG AATACCTGGT GCTGATGGCC GCCGACGGTG AAGTGGTCAA TCCGAACTGG ATCGAGTCGC TGCTCAACCA TGCCCAGCGT CCGGAAGTCG GCGTGGTCGG TGCGAAACTG GTGGACCGCG ATGGCAAGAT CGCTCAGGCC GGTCTGATTC TGGGGCTGAA CGATGGTGTC GGTTCTGCCT TCATCGGTGA GAAACATGAC GCCGAGGGCT ACATGCAGCG TCTGGCCGTG GATCAGAACT ACTCGGCGGT GTCGGGCATC TGCCTGATGA TTGGCAAAGC ACTGTTCAAT GCGCTGGATG GTCTGGATGA CGCGCAATTT GCTGACGGCT TCAGCGATGT CGATCTGTGC CTGAAGGCGG GTGAAGCCGG TTTCCTCACC GTCTGGACGC CGCTGGTTCA GGTCATCCAT TCGGGCGAGG TGCCGCAGGC TCCACAGGCA CTGCAAGCGC TGCGTGAAAA ATGGTCCGGC GCTTTTGCCC GGGACACGGC GTATAACCCG AACCTGAGCC TGAGCGGCAA AGGTTTTGTT CTCAACGAAA GTGCTTCGCT GGACTGGGCG CAGTTGCTCG CCTAA
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Protein sequence | MQGKNSSGHG LALNEQLTVV LISHERPAFL RRAVRFYSTL PCRILVLDSS AEAQPDMLGQ FANVDYQHLP QYGYWGICAK LAYGVEQLQT PYMVFAADDD FLVHDALHEA VAFMNANPDY SLCHGYSMMY LSLANSVSYY RRDKKVCEDY SADLAQDRLI DYMYQYLPPF YAVQRTEILR DWYAAMPQDT IFQWQEVGHT YYMLARGKAR ILPIPYVVRE LNYQHSDHNT EIYHSLAYTD ARHVAEREAF AGFLAGLPTQ VKHQDPEQGK QFVLDSFEAL ADSLRAGRAL TAELVFESAW TDIEAGPQRR FGPKQYVEMP FYNQAFFDQL TQFEFLLHSM PAGRLQLQGL EGIWARQQNL MLARNNDTPE SVVDRLWQAH DSNVFNRQVI TRLIDQLQSM GEEEDAQKLR DWIARLQATS LKGNDQAFGK MRTGRLLEWL AARQPDAGQL EAIAGHLAAH DGGPQFGIFL LDLDNDIDKL QITLDSLLEG HSKAFKVVVF TTGEPPAATT AQNTLHFVRV SPSNFVDKLN LSVNQSPCDW LLLAEAGDEF TAGGLLRAGL ELASADGCRA VATDEIQRTA DGALVDVFRP GFNLDLLQSL PALMARHWLI RREVLIEAGG YQADFSKALE FDLLLRIIEQ GGLDGLAHLD EPLLIAGASV LEENADERQA LLRHLGNRGY KAKITSSKPG TYQVDYRHGE QPLVSVIVPA IDDLPALQRC IEGVLLRTRY TRYEVLIAAG PNLSAAVNDW LGTLQHAKVR VLRADQPLGA VALSNAASQQ AQGEYLVLMA ADGEVVNPNW IESLLNHAQR PEVGVVGAKL VDRDGKIAQA GLILGLNDGV GSAFIGEKHD AEGYMQRLAV DQNYSAVSGI CLMIGKALFN ALDGLDDAQF ADGFSDVDLC LKAGEAGFLT VWTPLVQVIH SGEVPQAPQA LQALREKWSG AFARDTAYNP NLSLSGKGFV LNESASLDWA QLLA
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