| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1356 |
|---|
| Symbol | |
|---|
| ID | 3717303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1531360 |
|---|
| End bp | 1532181 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_347088 |
|---|
| Protein GI | 77457583 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.867049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC TGGCGGATAA GGTCCAACAG GATTTGGTTG AGGCCATCGA TAACGATGAC
CTGGTTCTGC CAACGTTACC GGAAGTGGCC CTGCAGATTC GCAAGGCCGC TGAAGATCCG
GATATCAGCG TCAGCGACCT GAGCAAAGTG ATCGGCCGCG ACACGGCGCT GTCGGCGCGC
CTGATCAAAG TGGTGAACAG CCCGCTGCTG CGCGCCACCC AGGAAGTCAC CGACCTGCAC
ACCGCCATTA CCCGGCTCGG CGTCAATTAC AGCAGCAACC TGGCGATCGG TCTGGTGATG
GAGCAGATCT TTCACGCCCG TTCCGACGTG GTCGAACAGA AGATGCGCGA AGTCTGGCGC
AAAAGCCTGG AAATCGCCGG CGTCAGCTAC GCCCTGTGCC GTCGGTATAC CCAGCTCAAG
CCCGATCAGG CCGCGCTCGG CGGACTGGTT CATCAGATCG GCGTGCTGCC GATCCTGACC
TATGCCGAAG ATCACTACGA ACTGCTGTCC GATCCGGTAA GCCTCAACCA TGTGATCGAT
CACATTCACC CGTTGCTCGG CGACAAATTA CTGCGGGTCT GGGAGTTTCC GGAGCGTCTG
GTGGAATTGC CGGGGCTGTA TCAGGACCTC AAGCGCGAAT CGCAGCAGAT CGATTACGTC
GACATCGTGC AAGTGGCCAG CCTGTATTGC CACAAGGACA CCGATCACCC GCTGGCCCGC
ATCGATCCGT TCAGCGTGCC GGCATTCCGC AAGCTCGGCA TCGACCCGGA GAACAAGGCG
CTGTGCACCG ATCTGGAAGA ATCGCGGTCG ATGTTCTACT GA
|
|---|
| Protein sequence | MSELADKVQQ DLVEAIDNDD LVLPTLPEVA LQIRKAAEDP DISVSDLSKV IGRDTALSAR
LIKVVNSPLL RATQEVTDLH TAITRLGVNY SSNLAIGLVM EQIFHARSDV VEQKMREVWR
KSLEIAGVSY ALCRRYTQLK PDQAALGGLV HQIGVLPILT YAEDHYELLS DPVSLNHVID
HIHPLLGDKL LRVWEFPERL VELPGLYQDL KRESQQIDYV DIVQVASLYC HKDTDHPLAR
IDPFSVPAFR KLGIDPENKA LCTDLEESRS MFY
|
|---|
| |