Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1313 |
Symbol | |
ID | 3717350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1488152 |
End bp | 1489060 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_347045 |
Protein GI | 77457540 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAAA AAAGCCTGAT CCGCCGCCTC GACCTGATCA CCCTGCAACT GTTCGTCGCC GTCCACGAGG AAGGCACGCT GACCCGTGCC GCGTCCCGCG AGGCGATTGC CGTGTCGGCG GCGAGCAAGC GCTTGATGGA GCTGGAGGAA GCGCTGGGCA TCAGCCTGTT CGTGCGTCAG GCCAAGGGCA TGACCCTGAC CCCGGCCGGC GAAACCCTGT TGCACCACGC CCGGCAGATG TTGTTCAACG TCGAGAAAAT GGGCCTTGAA CTGGGCGAGC ACAGCCACGG TGTGCGCGGC TATGTGCGGA TGCTGGCGAA CCTGTCGGCG ATCATTCAGT TTCTCCCCGA AGACCTGCGC GATTTCACCG CGCACCAGCC GCAGGTCAAG ACCGATCTGG AAGAGCGGCC CAGCGCCGGC GTGGTTCAGG GCGTGCTCGA TGGCGTGGCG GATCTTGGCA TCTGCTCCAG CGACAGCGAC ATCAAAGGCC TGCACAGCGT GCGCTATCGC CGGGACAAAC TGGTGGTGGT GATGTTGCCC GAGCATCCGT TGGCGGTGCG CGAATCCGTG GCGTTCAGTG AAACCCTCGA CAGCGATTAC GTCGGCCTGC ACGCCGCCAG TTCGATCAAC ATGCGCACCC ACGCTGCCGC GCGTCAGGCC GGCAAAGTGT TGCGCATCCG CATTCATGTG CCGGGCTTCG ATGCCGTGTG CCGGATGGTG CAGGCCAACA TGGGCATCGG CATCCTGCCG CAGCGGGCTT ATGAGTTGTT CGGTCGGGCG CTGGGGCTGC AGGCGGTGCC GCTGACCGAT GGCTGGTCGG ATCGTGACTT GCTCGTGGTG GTGCGTGACG AGGCCGGGTT GTCGCCGGTG AGCCGGATCC TGTTCGAGCA TTTGCGCGCA GCCAGCTGA
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Protein sequence | MLQKSLIRRL DLITLQLFVA VHEEGTLTRA ASREAIAVSA ASKRLMELEE ALGISLFVRQ AKGMTLTPAG ETLLHHARQM LFNVEKMGLE LGEHSHGVRG YVRMLANLSA IIQFLPEDLR DFTAHQPQVK TDLEERPSAG VVQGVLDGVA DLGICSSDSD IKGLHSVRYR RDKLVVVMLP EHPLAVRESV AFSETLDSDY VGLHAASSIN MRTHAAARQA GKVLRIRIHV PGFDAVCRMV QANMGIGILP QRAYELFGRA LGLQAVPLTD GWSDRDLLVV VRDEAGLSPV SRILFEHLRA AS
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