Gene Pfl01_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1313 
Symbol 
ID3717350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1488152 
End bp1489060 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_347045 
Protein GI77457540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAA AAAGCCTGAT CCGCCGCCTC GACCTGATCA CCCTGCAACT GTTCGTCGCC 
GTCCACGAGG AAGGCACGCT GACCCGTGCC GCGTCCCGCG AGGCGATTGC CGTGTCGGCG
GCGAGCAAGC GCTTGATGGA GCTGGAGGAA GCGCTGGGCA TCAGCCTGTT CGTGCGTCAG
GCCAAGGGCA TGACCCTGAC CCCGGCCGGC GAAACCCTGT TGCACCACGC CCGGCAGATG
TTGTTCAACG TCGAGAAAAT GGGCCTTGAA CTGGGCGAGC ACAGCCACGG TGTGCGCGGC
TATGTGCGGA TGCTGGCGAA CCTGTCGGCG ATCATTCAGT TTCTCCCCGA AGACCTGCGC
GATTTCACCG CGCACCAGCC GCAGGTCAAG ACCGATCTGG AAGAGCGGCC CAGCGCCGGC
GTGGTTCAGG GCGTGCTCGA TGGCGTGGCG GATCTTGGCA TCTGCTCCAG CGACAGCGAC
ATCAAAGGCC TGCACAGCGT GCGCTATCGC CGGGACAAAC TGGTGGTGGT GATGTTGCCC
GAGCATCCGT TGGCGGTGCG CGAATCCGTG GCGTTCAGTG AAACCCTCGA CAGCGATTAC
GTCGGCCTGC ACGCCGCCAG TTCGATCAAC ATGCGCACCC ACGCTGCCGC GCGTCAGGCC
GGCAAAGTGT TGCGCATCCG CATTCATGTG CCGGGCTTCG ATGCCGTGTG CCGGATGGTG
CAGGCCAACA TGGGCATCGG CATCCTGCCG CAGCGGGCTT ATGAGTTGTT CGGTCGGGCG
CTGGGGCTGC AGGCGGTGCC GCTGACCGAT GGCTGGTCGG ATCGTGACTT GCTCGTGGTG
GTGCGTGACG AGGCCGGGTT GTCGCCGGTG AGCCGGATCC TGTTCGAGCA TTTGCGCGCA
GCCAGCTGA
 
Protein sequence
MLQKSLIRRL DLITLQLFVA VHEEGTLTRA ASREAIAVSA ASKRLMELEE ALGISLFVRQ 
AKGMTLTPAG ETLLHHARQM LFNVEKMGLE LGEHSHGVRG YVRMLANLSA IIQFLPEDLR
DFTAHQPQVK TDLEERPSAG VVQGVLDGVA DLGICSSDSD IKGLHSVRYR RDKLVVVMLP
EHPLAVRESV AFSETLDSDY VGLHAASSIN MRTHAAARQA GKVLRIRIHV PGFDAVCRMV
QANMGIGILP QRAYELFGRA LGLQAVPLTD GWSDRDLLVV VRDEAGLSPV SRILFEHLRA
AS