Gene Pfl01_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1307 
Symbol 
ID3717344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1482104 
End bp1482985 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID 
Productdihydrodipicolinate synthetase 
Protein accessionYP_347039 
Protein GI77457534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACA TTCACGGCAT CATCGGCTAC ACCATCACCC CGTTCGGCGC CAACGGCGAA 
GGCGTTGACC TGCCGGCCCT CGGCCGCTCC ATCGACCGTC TGATCGCCGG CGGCGTCCAC
GCCATTGCGC CACTGGGCAG CACCGGCGAA GGCGCCTACC TGAGCGATGC GGAGTGGGAT
CAGGTCGCCG AGTTCAGCAT CAAGCACGTG GCCAAACGCG TGCCGACCGT GGTCAGCGTG
TCCGACCTGA CCACCGCCAA AGCGGTACGC CGCGCACGCT TTGCCGAAGC CCATGGCGCC
GACGTGGTGA TGGTGTTGCC GACGTCCTAC TGGAAGCTCA CCGAAGCGGA AATCCTCGCC
CACTACCGCG CCATCGGCGA CAGCATCGGC GTGCCGATCA TGCTCTACAA CAACCCGGCC
ACCAGCGGCA CCGACATGTC GGTGGAGCTG ATCCTGCGCA TCGTCAACGG CGTGGAGAAC
GTGACCATGG TCAAGGAGAG CACCGGCGAC ATCCAGCGCA TGCACAAGTT GCAACTGCTC
GGCGAAGGCC GGGTGCCGTT CTACAACGGT TGCAACCCGC TGGCGCTGGA GGCGTTCGCC
GCCGGGGCCA AGGGTTGGTG CACGGCAGCG CCGAACCTGA TCCCGCAGCT CAACCTGGAT
TTGTACGAAG CCACACTGGC GGGGGATCTC GGCAAGGCGC GGGAGCTGTT CTACCGCCAG
TTGCCGCTGC TGGACTTCAT CCTCAAGGGC GGCTTGCCGG CGACGATCAA GGCCGGTCTG
CGACTGACCG GTCTGGAAGT CGGCGATCCG CGTTTGCCGG TGTTCCCGCT GGCTGAGGCC
GGGCGTACGC AATTGCAGGC CTTGCTGTAC ACCTTGCGCT GA
 
Protein sequence
MSNIHGIIGY TITPFGANGE GVDLPALGRS IDRLIAGGVH AIAPLGSTGE GAYLSDAEWD 
QVAEFSIKHV AKRVPTVVSV SDLTTAKAVR RARFAEAHGA DVVMVLPTSY WKLTEAEILA
HYRAIGDSIG VPIMLYNNPA TSGTDMSVEL ILRIVNGVEN VTMVKESTGD IQRMHKLQLL
GEGRVPFYNG CNPLALEAFA AGAKGWCTAA PNLIPQLNLD LYEATLAGDL GKARELFYRQ
LPLLDFILKG GLPATIKAGL RLTGLEVGDP RLPVFPLAEA GRTQLQALLY TLR