Gene Pfl01_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1296 
Symbol 
ID3717372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1471501 
End bp1472658 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content64% 
IMG OID 
Productphospholipase D/transphosphatidylase 
Protein accessionYP_347028 
Protein GI77457523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0293816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCG CGGTGTTTCC GTGGCGTGAT GGCAACCGCT TCGAGCTGTT GATCGACGGC 
CCGCAATTCT TCCCGCGCAT GCTCGACGAG ATTGCCCGCG CCCGTGAGCA GATCGAACTG
GAGTTGTATC TGGTGGAAGC CGGTGCCTGT GCCGAAACCA TCGTGCAGGC ACTGGTGCTG
GCGGCGGAGC GGGGCGTGCG GGTGCGTTGC CTGTTCGATG ATTACGGCAG CCTCGCGTTC
ACCCTCACGC TGCGCCGGCG GCTGACTGGT GCCGGGGTCG AGCTGCGTTT TTACAACCGG
CTGAACTGGC GGCGCTGGGT CGGCAATTTC TATCGCGATC ATCGCAAGCT GTTGCTGGTC
GACCAGCGTC TGGCGGTGGT CGGCGGCACC GGGGTCACCG ATGAGTTCTG GACGCCGGGC
CACGACACCA GCGAATGGCA CGAGGTCATG GTGGAAATCA CCGGCCCGCT GGTGCTCGAC
TGGCAGTTGC TGTTCGACCG CCAATGGATC GCCAACCGCC ATCGCCGGGC CTGGCGGCCC
AACGCGCATT TTGGGCTGCC ACGGTTGCCC CGTGTGCCGG ACACGGGCGA GGGCATGGGC
CGTGTGGCCT ACGCCGACGC CCGCCAGCAT CGGGACATTC TGCAATCGCT GTTCCGCGCC
TTGAACAGTG GCCAAAAGCG TATCTGGCTG GCCACGCCGT ACTTCCTGCC GACCTGGAAA
ATCCGCCGCT CCCTGCGCAA GGCTGCCGCC CGTGGCCTCG ACGTGCGTCT GCTGCTGACC
GGGCCGCGCA CCGATCACCC GTCGGTGCGT TATGCCGGGC ATCGCTACTA CCCGCGCCTG
CTCAAGGCCG GGGTGAAAAT CTACGAATAC CAGCCGTGTT TCCTGCACCT GAAAATGGTG
CTGGTGGACG ACTGGGTGAG CATCGGCTCG TGCAATTTCG ATCACTGGAA TCTGCGCTTC
AATCTTGAAG CGAATCTGGA AGCGCTGGAT CCGTCATTGA CGGCAGCGGT GGCGGCGAGT
TTCGAGAAGG ACTTCGGCCT GAGTCAGCAG GTGAGTCTGG AGGAATGGCG AAAACGGCCA
CTGTGGCGGC GGGTGAAGCA GCGGATCTGG GGCTGGGTGG ATCGGGTGGT GGTCAACTTG
CTCGACAGAC GCGGCTAG
 
Protein sequence
MRGAVFPWRD GNRFELLIDG PQFFPRMLDE IARAREQIEL ELYLVEAGAC AETIVQALVL 
AAERGVRVRC LFDDYGSLAF TLTLRRRLTG AGVELRFYNR LNWRRWVGNF YRDHRKLLLV
DQRLAVVGGT GVTDEFWTPG HDTSEWHEVM VEITGPLVLD WQLLFDRQWI ANRHRRAWRP
NAHFGLPRLP RVPDTGEGMG RVAYADARQH RDILQSLFRA LNSGQKRIWL ATPYFLPTWK
IRRSLRKAAA RGLDVRLLLT GPRTDHPSVR YAGHRYYPRL LKAGVKIYEY QPCFLHLKMV
LVDDWVSIGS CNFDHWNLRF NLEANLEALD PSLTAAVAAS FEKDFGLSQQ VSLEEWRKRP
LWRRVKQRIW GWVDRVVVNL LDRRG