| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1294 |
|---|
| Symbol | |
|---|
| ID | 3717370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1470057 |
|---|
| End bp | 1470827 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_347026 |
|---|
| Protein GI | 77457521 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.102594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGCA AGGCAGACAC CGGCAGCGTG CGCTCGGTCG AACGGGCGCT GGCCATCGTC
GAGTTGCTCG GCGAGCATCA GGCGTTGGGG CTGGAAGAGT TGCACTATCT GACGGCTCTG
CCCAAGGCCA CGGTGTCGCG GATGCTCGCG ACCTTGCAGG AGCAGGGCTG GGTCTATCGC
GGCCTCAGCG ATCGCCGCTA CCGGTTGTGC GCCAAGCGAC TGTTCGGTGA CCGTCAGCAA
CGTTTCAAAC GCCACCTTGT GGAAAGCGCC GCGCCGATGC TGCTGGAGCT GAGCGAGCGC
ACCGGGCTGG TGGCGGATCT GTCGTGCTTC GACGGCGAGC GGGTCGAAGT GATGGAAAGC
GCGATTCCGC AAGTGCTGCG CAAGCGCTAT CCGAACAACT GTCAGATCGT CGGCCATCAC
GCCAGCCTGT TTCATTCGGC GATGGGCCGC GCGTGCCTTG GCGAACTTGA TAGCCGGGAC
GTGAAACGTC TGGCCGAACG CGAACAGTTG GCGGATGACG GTGTATTGCA GGCCACCGAA
CAAGCCTTGC ATCAGGGCTT CGGCCAGCGC ACAGAAGGTT ATTGGGAATA CCCGGTGCGC
CTGCCGTTCC TGATTCGCGC GGTGGCCTTG CCGATCCGTG CCCAAGGGCG GCTGGTCGGC
AGCATGGCGC TGCACTGGCC AATGGATCAG GCGCCGGTGG AACGGGTGCT GAGCCTGCAC
CTCAACAGCC TCGCGTCGAC CATCGGCGAG GTGCAACAGG CACTGTCCTG A
|
|---|
| Protein sequence | MGSKADTGSV RSVERALAIV ELLGEHQALG LEELHYLTAL PKATVSRMLA TLQEQGWVYR
GLSDRRYRLC AKRLFGDRQQ RFKRHLVESA APMLLELSER TGLVADLSCF DGERVEVMES
AIPQVLRKRY PNNCQIVGHH ASLFHSAMGR ACLGELDSRD VKRLAEREQL ADDGVLQATE
QALHQGFGQR TEGYWEYPVR LPFLIRAVAL PIRAQGRLVG SMALHWPMDQ APVERVLSLH
LNSLASTIGE VQQALS
|
|---|
| |