Gene Pfl01_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1237 
Symbol 
ID3717086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1409607 
End bp1410260 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative lipoprotein 
Protein accessionYP_346969 
Protein GI77457464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.933604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTTG CCCGTTCCCT GATCGTTGTT GCCCTGCTCC CGTTGTTTGC CGCGTGCCAG 
TTGTTCGATG GTGCGCGGGA AAGCGCCTCC CACGTCGGCC AGACGCGGAT GCAGGGGCAA
CTGACCGCTA CCGACGGCAA ACTGGTGTTC CAGGCCTGCG GCGAGCAGCG CCAGTACGTG
GTCAATGACG TCGGCGGCAC CAGCGTCCTG CAGGAGGCCG CCACCCTGGC CGATCAACAG
GGCAAGCTGT TCGCCGACGT GCGCGGGAAG ATCGCCGGCG ATCGCCTCGA CCTGACCCAG
CTCTATCGCG TCGAACGCTC CGGCACCGCC TGCGACGACC CCAACTTCAA ACAGCTGATC
CTGCGCGCCG CCGGTCATGG CCCGGAATGG AACGTCAAGG TCAGCGGCAA GGGCCTGGTC
ATCGACCGCG AAGGCCAGCC ACCGCTCGCC GTGCCTTACG TCGAAGAGCA ACTGGGCGAC
GGTCGTTTCA ACCTCAGCAG CGAAGCCAAC AACCAGCGCA TCGAGTTGTG GGTCGCGCCG
CAGCGTTGCG TCGACAGCAG CACGGGCAGC GTGCAGCACA TGAGCGCCGA GTTGCGTATC
GACGGCCAGG TACAGCGCGG TTGCGGGTAT TTCGGCGGTT CGCGTAACGA CTGA
 
Protein sequence
MRVARSLIVV ALLPLFAACQ LFDGARESAS HVGQTRMQGQ LTATDGKLVF QACGEQRQYV 
VNDVGGTSVL QEAATLADQQ GKLFADVRGK IAGDRLDLTQ LYRVERSGTA CDDPNFKQLI
LRAAGHGPEW NVKVSGKGLV IDREGQPPLA VPYVEEQLGD GRFNLSSEAN NQRIELWVAP
QRCVDSSTGS VQHMSAELRI DGQVQRGCGY FGGSRND