Gene Pfl01_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1221 
Symbol 
ID3717070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1392412 
End bp1393134 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID 
ProductOmpA/MotB 
Protein accessionYP_346953 
Protein GI77457448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTC TTACAAGGTC CGTCTTGCCG GTTCTGCTGC TGGGCAGCCT GTTGACCGGT 
TGCGCCACCC ACAGCGATGG CACCGCTCCC CTCAATCAAC GTACCTGGCC GATCTGCAGC
CTCATTGGCG GACTGGTCGG CGGCGGTCTC GGCGCGCTCG AAAGTGGCGG CTGGGCCGGC
GGTGGCGCTG CGCTGGGGAT CCTCACCGGC GGATTGATCT GCTATGCCCA GGATGGCGAT
GAAGACGACG ACGGCGTGTT CGATCGCCGC GACCGTTGCC CCGATACCCC GGCCAACACC
CCGGTCGACC ACCGTGGCTG TCCGCTGCCG CAATATCCGG TCACCGAGAA ACCTGCCGAA
CCGGCCCCGC AAACCGAAGT CATCACCCTC AACGATGCCG GCAACGTGCT GTTCGACTTC
GACAAGTCCG ATCTGAAACC GGCCGCGAAA AGCCAGCTGG ACACGCTGAT GGACAAACTG
CGCAATGCCG ACGTGGTGAG CATCAAGGTC ATCGGTCACA CCGACAGCAA GGGTTCGGAC
GCCTACAACC AGGCACTTTC GGAGCGCCGC GCCAGCAGTG TGGCGGAGTA TTTGCTGAGT
CAGGGCCTGG CGCCGAACAA ACTCACCAGT GAAGGGCGTG GCGAGAGCGA ACCGGTCGCC
GATAACAACA CGGACGAGGG GCGTGCACAA AACCGTCGGG TGGAACTGCA CATCAATCGT
TAG
 
Protein sequence
MSVLTRSVLP VLLLGSLLTG CATHSDGTAP LNQRTWPICS LIGGLVGGGL GALESGGWAG 
GGAALGILTG GLICYAQDGD EDDDGVFDRR DRCPDTPANT PVDHRGCPLP QYPVTEKPAE
PAPQTEVITL NDAGNVLFDF DKSDLKPAAK SQLDTLMDKL RNADVVSIKV IGHTDSKGSD
AYNQALSERR ASSVAEYLLS QGLAPNKLTS EGRGESEPVA DNNTDEGRAQ NRRVELHINR