Gene Pfl01_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1189 
Symbol 
ID3716959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1356328 
End bp1357038 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content65% 
IMG OID 
ProductRNA-binding S4 
Protein accessionYP_346921 
Protein GI77457416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.206395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC CGATTCGCCT CTCCAAACGC CTCATCGAGC TGGTCGGTTG CTCCCGCCGG 
GAGGCCGAGC TGTTCATCGA GGGCGGCTGG GTCACCGTGG ACGGCGAAGT CATCGACGAG
CCGCAGTTCA AGGTCGGCGA CCAGAAAGTC GAGCTCGACA AGGATGCCAA GGCCACCGCG
CCGGAGCCGG TGACTATCCT GCTCAACGTG CCGGCGGGCA TGGATGTCGA CAGCGCCATG
CAGTCGCTGA ACGCCGAAAC CCTCAGCGAA GAACACCGCT ACGGCAAGCG TCCGCTGCGC
GGGCACTTCC TGCGCCTGAC CGCCAGCGCC GACCTGCAAC CCAAGGCCAG CGGCCTGCTG
GTGTTCACCC AGGACTGGAA GGTGCTGCGC AAGCTCACCG CCGACGCGGC CAAGATCGAG
CAGGAATACG TGGTCGAAGT CGAAGGCGAC ATGGTTGCCC ACGGCCTCAA TCGCCTGCAG
CACGGCCTCA CCCACAAGGG CAAGGAGCTG CCGCCGGTCA AGGCCAGTTG GCAGAACGAA
AACCGCCTGC GCTTCGCCAT GAAGAACCCG CAGCCGGGGA TCATCGCCCA GTTCTGCGAA
GCGGTCGGCC TGAAGGTCAT CGGCATACGC CGGATCCGCA TCGGCGGCGT GTCCATCGGC
AAGGTGCCGG TCGGCCAATG GCGCTACCTG TCCGGCAAAG AGAAATTCTA A
 
Protein sequence
MTDPIRLSKR LIELVGCSRR EAELFIEGGW VTVDGEVIDE PQFKVGDQKV ELDKDAKATA 
PEPVTILLNV PAGMDVDSAM QSLNAETLSE EHRYGKRPLR GHFLRLTASA DLQPKASGLL
VFTQDWKVLR KLTADAAKIE QEYVVEVEGD MVAHGLNRLQ HGLTHKGKEL PPVKASWQNE
NRLRFAMKNP QPGIIAQFCE AVGLKVIGIR RIRIGGVSIG KVPVGQWRYL SGKEKF