Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1189 |
Symbol | |
ID | 3716959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1356328 |
End bp | 1357038 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | RNA-binding S4 |
Protein accession | YP_346921 |
Protein GI | 77457416 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.206395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACC CGATTCGCCT CTCCAAACGC CTCATCGAGC TGGTCGGTTG CTCCCGCCGG GAGGCCGAGC TGTTCATCGA GGGCGGCTGG GTCACCGTGG ACGGCGAAGT CATCGACGAG CCGCAGTTCA AGGTCGGCGA CCAGAAAGTC GAGCTCGACA AGGATGCCAA GGCCACCGCG CCGGAGCCGG TGACTATCCT GCTCAACGTG CCGGCGGGCA TGGATGTCGA CAGCGCCATG CAGTCGCTGA ACGCCGAAAC CCTCAGCGAA GAACACCGCT ACGGCAAGCG TCCGCTGCGC GGGCACTTCC TGCGCCTGAC CGCCAGCGCC GACCTGCAAC CCAAGGCCAG CGGCCTGCTG GTGTTCACCC AGGACTGGAA GGTGCTGCGC AAGCTCACCG CCGACGCGGC CAAGATCGAG CAGGAATACG TGGTCGAAGT CGAAGGCGAC ATGGTTGCCC ACGGCCTCAA TCGCCTGCAG CACGGCCTCA CCCACAAGGG CAAGGAGCTG CCGCCGGTCA AGGCCAGTTG GCAGAACGAA AACCGCCTGC GCTTCGCCAT GAAGAACCCG CAGCCGGGGA TCATCGCCCA GTTCTGCGAA GCGGTCGGCC TGAAGGTCAT CGGCATACGC CGGATCCGCA TCGGCGGCGT GTCCATCGGC AAGGTGCCGG TCGGCCAATG GCGCTACCTG TCCGGCAAAG AGAAATTCTA A
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Protein sequence | MTDPIRLSKR LIELVGCSRR EAELFIEGGW VTVDGEVIDE PQFKVGDQKV ELDKDAKATA PEPVTILLNV PAGMDVDSAM QSLNAETLSE EHRYGKRPLR GHFLRLTASA DLQPKASGLL VFTQDWKVLR KLTADAAKIE QEYVVEVEGD MVAHGLNRLQ HGLTHKGKEL PPVKASWQNE NRLRFAMKNP QPGIIAQFCE AVGLKVIGIR RIRIGGVSIG KVPVGQWRYL SGKEKF
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