| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1162 |
|---|
| Symbol | |
|---|
| ID | 3716755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1336522 |
|---|
| End bp | 1337565 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | baseplate J-like protein |
|---|
| Protein accession | YP_346894 |
|---|
| Protein GI | 77457389 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTTG AAACCCCTTC GCTGCCGGTG CTGATCAAGC GCACCCAAAG CGACCTGGCC
GGCGATTCGC TGCGCCAGTC CGATGCGCAA GTCCTGGCCC GCACACTCGG CGGCGCCGCT
TATGGCCTGT ACGGCTACCT CGACTGGATT GCCGAGCAGA TCCTGCCCGA CACCGCCGAT
GAATCGACCC TGGAACGCAT CGCCGCGCTG CGCCTGAACC AGCCGCGCAA ACCGGCCCAG
GTCGCCACCG GCAACGTCAG CTTCAACGCG ACGGCGGGCG CAGTGCTGGA TGCTGATACG
TTGCTGCAGG CGGGTGATGG CCGCACATTC AAGGTCTCCG CCACCCGCAC CACCGTCAAT
GGCGTCAACA CGACCAGCAT CGCCGCGCTG GAGGCCGGCA GCCTGGGCAA CGCCGAAGCC
GGGCTGGCAC TGACGCCGGT ACAGCCGATC GCCGGCGTGG TCGGCAACAG TTTCGTGGTG
CTGGCGCCCG GACTGAACGG CGGCGTGGCG CGAGAAAGCC TGGAGTCGTT GCGCTCGCGG
GTCATTCGTT CCTATCGCGT GATCCCCCAC GGCGGTTCGG CCAGCGACTA TGAGACCTGG
GCGCTGGAAG TGCCGGGCGT GACCCGCGCC TGGTGCCGTG GCGGCTTCCT CGGGCCGGGC
ACCGTCGGCG TGTACATCAT GCGCGACGAC GATCCGCAAC CGGTGCCCAA TGCCGATCAA
CTGGCCGAAG TGCAGGCCTA CATCGAGCCG TTGCGCCCGG TGACTGCCGA AGTGCATGTA
CGCCCGCCGG TGCAGAAGCC GGTGACCTAT CAACTGAAGC TGACCCCCGA CACCACCGCC
GTGCGCGCGG CTGTCGAAAC CCAGTTGCGC GATCTGCACA ACCGCGAAGC CGATCTGGGC
GCGGATCTGT TGATCAGCCA TATCCGCGAA GCGATCAGCA GCGCGGCAGG TGAGACCGAC
CATGTCCTCT CGGCCCCGGT GGCGAACGTG GCCGCGGGTG ACAGCGAACT GCTGACCTTC
GGGGGTTGCG TATGGCTGCC ATAA
|
|---|
| Protein sequence | MPFETPSLPV LIKRTQSDLA GDSLRQSDAQ VLARTLGGAA YGLYGYLDWI AEQILPDTAD
ESTLERIAAL RLNQPRKPAQ VATGNVSFNA TAGAVLDADT LLQAGDGRTF KVSATRTTVN
GVNTTSIAAL EAGSLGNAEA GLALTPVQPI AGVVGNSFVV LAPGLNGGVA RESLESLRSR
VIRSYRVIPH GGSASDYETW ALEVPGVTRA WCRGGFLGPG TVGVYIMRDD DPQPVPNADQ
LAEVQAYIEP LRPVTAEVHV RPPVQKPVTY QLKLTPDTTA VRAAVETQLR DLHNREADLG
ADLLISHIRE AISSAAGETD HVLSAPVANV AAGDSELLTF GGCVWLP
|
|---|
| |