Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1049 |
Symbol | |
ID | 3716179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1215510 |
End bp | 1216997 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | gamma-aminobutyraldehyde dehydrogenase |
Protein accession | YP_346781 |
Protein GI | 255961278 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.451266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCATAC AAGAAAAGAG ATCACGGAAA ATGGCTGGCG CGCAGACCCA CATGCATACC GCGTTGCTGA TCGACGGCGA ACTGGTCGCC GGCCAGGGTT TTGTCGAACC GATCCTCAAC CCGGCCACCG GCGAAGTCCT GACCCAGATC GCCGAAGCCA GCACCGAGCA AGTCGAAGCC GCCATCCTCG CCGCCCACCG CGCTTTTGCC GAGTGGTCGC GCACCACCCC GCAACAACGT TCGAACCTGC TGCTGGAAAT CGCCAACGCC GTCGAAAAGC ACGCTGACCA CCTCGCCCGC CTCGAAGCAC TGAACTGCGG TAAGCCGCTG CATCTGGCGC GGCAGGACGA TTTAACCGCG ACCATCGATG TGTTCCGCTT CTTCGCCGGC GCCGTGCGCT GCCAGACCGG CCAGCTCAGC GGCGAATACG TGCCGGGTTA CACCAGCATG GTGCGCCGCG ATCCGATTGG CGTCGTCGCC TCGATTGCGC CGTGGAACTA CCCGATCATG ATGGCCGCGT GGAAGATCGC CCCGGCCCTC GCCGCCGGCA ATACGCTGGT GTTCAAGCCT TCCGAGCACA CGCCGCTGTC GATTCTGGCG CTGGCTCCGG CGTTGGCCGA AATCCTGCCG CGCGGGGTGA TCAATATCGT CTGCGGTGGC GGCGAAGGGG TTGGCAGTCA CTTGGTCGGG CATCCGAAAG TGCGCATGGT GTCGCTGACC GGCGATATCG TCACCGGCCA GAAAATTCTC CAGGCCGCCG CCAAAACCCT CAAACGCACG CACCTCGAAC TCGGCGGCAA GGCCCCGGTG ATCGTGTGCA ACGATGCCGA TCTCAAAGCC GTGGTCGAAG GCGTGCGCAC TTATGGCTAT TACAACGCCG GGCAGGACTG CACGGCGGCT TGCCGGATTT ACGCCCAGGC CGGGATTCAC GACAAATTGG TCGCCGAGCT CGGTGCGGCG GTCAGCAGCC TGCGCTTCGC CGGCAAACGC GACGCCGACA ACGAGATCGG TCCGCTGATC AGCACCCGCC AGCGCGACCG CGTGGCCAGC TTCGTCGAGC GCGCCCTCGG CCAGCCGCAC ATCGAGCGGG TGACCGGCGC GGCGGTGCAT TCCGGCGCCG GGTTCTTCTA TCAGCCAACC CTGCTGGCCG GTTGCAAACA GAGCGATGAA ATCGTCCAGC GCGAAGTGTT CGGCCCGGTG GTGACCGTGA CCCGCTTCGA CGAACTGGCG CAAGCGGTGG ACTGGGCCAA CGACTCGGAA TACGGCCTCG CTTCGTCGGT CTGGACCCAG AACCTGGACA AGGCGATGCA GGTCGCCGCA CGCCTGCAGT ACGGCTGCAC CTGGATCAAC AGCCATTTCA TGCTGGCCAG CGAAATGCCC CACGGCGGGT TGAAACGCTC CGGTTACGGC AAAGACTTAT CCAGCGATTC GCTGCAGGAC TACAGCGTGG TGCGGCACAT CATGGCCCGC CACGGCCAGC ATCTCTGA
|
Protein sequence | MAIQEKRSRK MAGAQTHMHT ALLIDGELVA GQGFVEPILN PATGEVLTQI AEASTEQVEA AILAAHRAFA EWSRTTPQQR SNLLLEIANA VEKHADHLAR LEALNCGKPL HLARQDDLTA TIDVFRFFAG AVRCQTGQLS GEYVPGYTSM VRRDPIGVVA SIAPWNYPIM MAAWKIAPAL AAGNTLVFKP SEHTPLSILA LAPALAEILP RGVINIVCGG GEGVGSHLVG HPKVRMVSLT GDIVTGQKIL QAAAKTLKRT HLELGGKAPV IVCNDADLKA VVEGVRTYGY YNAGQDCTAA CRIYAQAGIH DKLVAELGAA VSSLRFAGKR DADNEIGPLI STRQRDRVAS FVERALGQPH IERVTGAAVH SGAGFFYQPT LLAGCKQSDE IVQREVFGPV VTVTRFDELA QAVDWANDSE YGLASSVWTQ NLDKAMQVAA RLQYGCTWIN SHFMLASEMP HGGLKRSGYG KDLSSDSLQD YSVVRHIMAR HGQHL
|
| |