| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1048 |
|---|
| Symbol | |
|---|
| ID | 3716178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1214276 |
|---|
| End bp | 1215427 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_346780 |
|---|
| Protein GI | 77457275 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.357098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.451266 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTGC ACAAGACCGC ACTGCTCAGT GCAATCACCA TGGCCCTGCT GGCCAGCGCC
AGCCTGCAGG CCGCCGAGCC GCTGAAAGCC GTCGGCGCCG GCGAAGGCCA GCTGGATATC
GTCGCCTGGC CCGGCTACAT CGAACGCGGT GAAAGCGACA AGGCCTACGA CTGGGTGACC
GGTTTCGAGA AGGAAACCGG CTGCAAGGTC AATGTGAAAA CCGCCGCCAC CTCTGACGAA
ATGGTCAGCC TGATGGCCAA GGGCGGTTAC GACCTGGTGA CCGCGTCGGG CGATGCCTCG
TTGCGGTTGA TCGTCGGCAA GCGTGTGCAA CCGATCAACA CCGCGTTGAT CCCGAACTGG
AAATCCCTCG ACCCGCGCCT GAAAGACGCA CCGTGGTACG TCGTCAACAA CCAGACCTTC
GGCACCCCGT ACCAGTGGGG CCCGAACGTG CTGATGTACA ACACCAACGT GTTCAAGACC
GCGCCGACCA GCTGGAACGT GGTGTTCGAC GCGCAGAACC TGCCGGACGG CAAGCCGAAC
AAGGGCCGCG TGCAAGCCTA CGACGGCCCG ATCTACATCG CCGATGCGGC GCTGTACCTG
AAATCCACCA AGCCTGAGCT GGGGATCAAG GATCCGTACC AACTCACCGA AGATCAGTAC
AAGGCTGTGC TGGAACTGTT GCGCGCCCAG CAGAAGCTGA TTCACCGCTA CTGGCACGAC
ACCACGGTGC AGATGAGCGA CTTCAAGAAC GAAGGCGTGG TCGCGTCCAG CGCCTGGCCG
TATCAGGTCA ATGGGCTGAT CAACGAGAAA CAGCCGATCG CTTCGACCGT GCCGAAAGAA
GGCGCCACCG GCTGGGCCGA CACCACCATG CTGCACGCCG AAGCCAAGCA CCCGAACTGC
GCGTACAAGT GGATGGACTG GTCGCTGCAA CCGAAAGTCC AGGGTGATGT GGCGGCCTGG
TTCGGTTCGT TGCCGGCGGT TCCGGCGGCG TGTCAGGGCA GTGAGTTGCT CGGGGCTGAA
GGCTGCAAGA CCAACGGCTT TGATCAGTTC GACAAGATCG CTTTCTGGAA AACCCCGCAG
GCTGAGGGTG GGAAGTTTGT GCCGTATAGC CGGTGGACGC AGGACTACAT TGCGATTATG
GGCGGTAGGT AG
|
|---|
| Protein sequence | MFVHKTALLS AITMALLASA SLQAAEPLKA VGAGEGQLDI VAWPGYIERG ESDKAYDWVT
GFEKETGCKV NVKTAATSDE MVSLMAKGGY DLVTASGDAS LRLIVGKRVQ PINTALIPNW
KSLDPRLKDA PWYVVNNQTF GTPYQWGPNV LMYNTNVFKT APTSWNVVFD AQNLPDGKPN
KGRVQAYDGP IYIADAALYL KSTKPELGIK DPYQLTEDQY KAVLELLRAQ QKLIHRYWHD
TTVQMSDFKN EGVVASSAWP YQVNGLINEK QPIASTVPKE GATGWADTTM LHAEAKHPNC
AYKWMDWSLQ PKVQGDVAAW FGSLPAVPAA CQGSELLGAE GCKTNGFDQF DKIAFWKTPQ
AEGGKFVPYS RWTQDYIAIM GGR
|
|---|
| |