Gene Pfl01_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1040 
Symbol 
ID3716170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1205336 
End bp1205848 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346772 
Protein GI77457267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.57663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATC AAACTCAAAA TTCCTCTAAA GATCATCCTT ACTTCATCCC CACCGTATTC 
ACCCGCCACA ACCGCTTCCT CCACGCTCTC CTTCTCGATC ACCAAGCCTG GTTCTGCGCT
CAGGATCTCG GCCGCATGAT GGGCCATCCC TTGAACCCAC GCGTCACCCT GAAACTCGAC
CCCGACCAAC GCCGCACCGT CCGGCTGAGC AAGTACGGCA AAGTTGTCGA GACGCCAATG
GTCAGCGAAT CCGGCATGTT TGCGCTGCTG GTTCACCATT TCATCCCGGA AAACCGCAAC
CTGCGCCAAT GGCTGAGTAA TGAAGTCATT CCCATCCTGC GGGAAACCAG CTCAGTAACA
GCGGAGAACT GCCCGAGCCT GAGCTCGATG CATTGGGCCG GCGTCACCGT GCCGCTGTTG
CACTGGCAAC AACAGGCTTG GGTGAAATGG CGTGATATGC CGGAATTAGT GCTTGGTCAG
CAGCCCTATC TGGTCGCGGG GACATGTAGC TGA
 
Protein sequence
MPNQTQNSSK DHPYFIPTVF TRHNRFLHAL LLDHQAWFCA QDLGRMMGHP LNPRVTLKLD 
PDQRRTVRLS KYGKVVETPM VSESGMFALL VHHFIPENRN LRQWLSNEVI PILRETSSVT
AENCPSLSSM HWAGVTVPLL HWQQQAWVKW RDMPELVLGQ QPYLVAGTCS